Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.47■□□□□ 0.39
C3orf56Q8N813 NCF1B-203ENST00000435988 1254 ntBASIC17.47■□□□□ 0.39
C3orf56Q8N813 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C3orf56Q8N813 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C3orf56Q8N813 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
C3orf56Q8N813 AC010501.1-201ENST00000606270 1962 ntBASIC17.47■□□□□ 0.39
C3orf56Q8N813 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C3orf56Q8N813 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
C3orf56Q8N813 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C3orf56Q8N813 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C3orf56Q8N813 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C3orf56Q8N813 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
C3orf56Q8N813 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C3orf56Q8N813 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.46■□□□□ 0.39
C3orf56Q8N813 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
C3orf56Q8N813 TSPY20P-201ENST00000450910 630 ntBASIC17.46■□□□□ 0.39
C3orf56Q8N813 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C3orf56Q8N813 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.46■□□□□ 0.39
C3orf56Q8N813 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
C3orf56Q8N813 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
C3orf56Q8N813 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C3orf56Q8N813 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
C3orf56Q8N813 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.46■□□□□ 0.38
C3orf56Q8N813 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.45■□□□□ 0.38
C3orf56Q8N813 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
C3orf56Q8N813 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C3orf56Q8N813 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
C3orf56Q8N813 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C3orf56Q8N813 KRT19P1-201ENST00000405746 1186 ntBASIC17.45■□□□□ 0.38
C3orf56Q8N813 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.45■□□□□ 0.38
C3orf56Q8N813 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C3orf56Q8N813 CROCCP5-201ENST00000436658 830 ntBASIC17.45■□□□□ 0.38
C3orf56Q8N813 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.45■□□□□ 0.38
C3orf56Q8N813 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.45■□□□□ 0.38
C3orf56Q8N813 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.45■□□□□ 0.38
C3orf56Q8N813 AC010525.1-201ENST00000585559 441 ntBASIC17.45■□□□□ 0.38
C3orf56Q8N813 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.45■□□□□ 0.38
C3orf56Q8N813 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.45■□□□□ 0.38
C3orf56Q8N813 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
C3orf56Q8N813 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
C3orf56Q8N813 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
C3orf56Q8N813 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C3orf56Q8N813 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.45■□□□□ 0.38
C3orf56Q8N813 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.45■□□□□ 0.38
C3orf56Q8N813 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
C3orf56Q8N813 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
C3orf56Q8N813 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
C3orf56Q8N813 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
C3orf56Q8N813 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
C3orf56Q8N813 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
C3orf56Q8N813 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C3orf56Q8N813 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.44■□□□□ 0.38
C3orf56Q8N813 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C3orf56Q8N813 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C3orf56Q8N813 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.44■□□□□ 0.38
C3orf56Q8N813 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C3orf56Q8N813 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.44■□□□□ 0.38
C3orf56Q8N813 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
C3orf56Q8N813 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.44■□□□□ 0.38
C3orf56Q8N813 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.44■□□□□ 0.38
C3orf56Q8N813 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.44■□□□□ 0.38
C3orf56Q8N813 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
C3orf56Q8N813 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C3orf56Q8N813 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
C3orf56Q8N813 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
C3orf56Q8N813 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
C3orf56Q8N813 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
C3orf56Q8N813 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.43■□□□□ 0.38
C3orf56Q8N813 MIR663A-201ENST00000385250 93 ntBASIC17.43■□□□□ 0.38
C3orf56Q8N813 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C3orf56Q8N813 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
C3orf56Q8N813 OR2I1P-207ENST00000453522 948 ntBASIC17.43■□□□□ 0.38
C3orf56Q8N813 AL499627.2-201ENST00000606283 725 ntBASIC17.43■□□□□ 0.38
C3orf56Q8N813 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.43■□□□□ 0.38
C3orf56Q8N813 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
C3orf56Q8N813 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
C3orf56Q8N813 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C3orf56Q8N813 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
C3orf56Q8N813 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C3orf56Q8N813 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
C3orf56Q8N813 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.42■□□□□ 0.38
C3orf56Q8N813 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
C3orf56Q8N813 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C3orf56Q8N813 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
C3orf56Q8N813 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C3orf56Q8N813 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
C3orf56Q8N813 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.42■□□□□ 0.38
C3orf56Q8N813 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
C3orf56Q8N813 KRT18P11-201ENST00000435214 1283 ntBASIC17.42■□□□□ 0.38
C3orf56Q8N813 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
C3orf56Q8N813 DUX4L4-201ENST00000566884 1269 ntBASIC17.42■□□□□ 0.38
C3orf56Q8N813 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.42■□□□□ 0.38
C3orf56Q8N813 AC142086.6-201ENST00000621154 1765 ntBASIC17.42■□□□□ 0.38
C3orf56Q8N813 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C3orf56Q8N813 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
C3orf56Q8N813 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
C3orf56Q8N813 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
C3orf56Q8N813 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
C3orf56Q8N813 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
C3orf56Q8N813 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms