Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.12■■□□□ 1.13
TRAM1L1Q8N609 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAM1L1Q8N609 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAM1L1Q8N609 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAM1L1Q8N609 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAM1L1Q8N609 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.12■■□□□ 1.13
TRAM1L1Q8N609 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAM1L1Q8N609 AC011298.3-201ENST00000615796 283 ntBASIC22.12■■□□□ 1.13
TRAM1L1Q8N609 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAM1L1Q8N609 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRAM1L1Q8N609 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRAM1L1Q8N609 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAM1L1Q8N609 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRAM1L1Q8N609 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.11■■□□□ 1.13
TRAM1L1Q8N609 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.11■■□□□ 1.13
TRAM1L1Q8N609 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.11■■□□□ 1.13
TRAM1L1Q8N609 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.11■■□□□ 1.13
TRAM1L1Q8N609 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
TRAM1L1Q8N609 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAM1L1Q8N609 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.11■■□□□ 1.13
TRAM1L1Q8N609 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.11■■□□□ 1.13
TRAM1L1Q8N609 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAM1L1Q8N609 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.11■■□□□ 1.13
TRAM1L1Q8N609 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.11■■□□□ 1.13
TRAM1L1Q8N609 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAM1L1Q8N609 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 AC135279.3-201ENST00000610945 1311 ntBASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 AC106739.1-201ENST00000617035 715 ntBASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.1■■□□□ 1.13
TRAM1L1Q8N609 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRAM1L1Q8N609 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRAM1L1Q8N609 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRAM1L1Q8N609 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.09■■□□□ 1.13
TRAM1L1Q8N609 PBX2P1-201ENST00000493219 1291 ntBASIC22.09■■□□□ 1.13
TRAM1L1Q8N609 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TRAM1L1Q8N609 AC024257.2-201ENST00000549699 147 ntBASIC22.09■■□□□ 1.13
TRAM1L1Q8N609 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.09■■□□□ 1.13
TRAM1L1Q8N609 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
TRAM1L1Q8N609 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
TRAM1L1Q8N609 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRAM1L1Q8N609 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRAM1L1Q8N609 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.09■■□□□ 1.13
TRAM1L1Q8N609 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRAM1L1Q8N609 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRAM1L1Q8N609 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRAM1L1Q8N609 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
TRAM1L1Q8N609 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.08■■□□□ 1.13
TRAM1L1Q8N609 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.08■■□□□ 1.13
TRAM1L1Q8N609 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.08■■□□□ 1.13
TRAM1L1Q8N609 AC136469.2-201ENST00000623944 1028 ntBASIC22.08■■□□□ 1.13
TRAM1L1Q8N609 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRAM1L1Q8N609 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRAM1L1Q8N609 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TRAM1L1Q8N609 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TRAM1L1Q8N609 DUSP8P3-201ENST00000399571 1760 ntBASIC22.07■■□□□ 1.12
TRAM1L1Q8N609 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRAM1L1Q8N609 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
TRAM1L1Q8N609 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRAM1L1Q8N609 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.07■■□□□ 1.12
TRAM1L1Q8N609 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.07■■□□□ 1.12
TRAM1L1Q8N609 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRAM1L1Q8N609 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRAM1L1Q8N609 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.07■■□□□ 1.12
TRAM1L1Q8N609 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 AC133637.1-201ENST00000624115 1537 ntBASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRAM1L1Q8N609 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.05■■□□□ 1.12
TRAM1L1Q8N609 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRAM1L1Q8N609 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
TRAM1L1Q8N609 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.05■■□□□ 1.12
TRAM1L1Q8N609 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRAM1L1Q8N609 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms