Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF561Q8N587 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
ZNF561Q8N587 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF561Q8N587 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF561Q8N587 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF561Q8N587 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF561Q8N587 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF561Q8N587 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF561Q8N587 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF561Q8N587 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF561Q8N587 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF561Q8N587 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF561Q8N587 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ZNF561Q8N587 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
ZNF561Q8N587 KRT16P3-201ENST00000439127 1283 ntBASIC18.88■□□□□ 0.61
ZNF561Q8N587 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ZNF561Q8N587 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ZNF561Q8N587 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF561Q8N587 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF561Q8N587 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF561Q8N587 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF561Q8N587 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF561Q8N587 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF561Q8N587 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.88■□□□□ 0.61
ZNF561Q8N587 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ZNF561Q8N587 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
ZNF561Q8N587 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF561Q8N587 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ZNF561Q8N587 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ZNF561Q8N587 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.87■□□□□ 0.61
ZNF561Q8N587 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF561Q8N587 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ZNF561Q8N587 MIR6724-1-201ENST00000616420 92 ntBASIC18.87■□□□□ 0.61
ZNF561Q8N587 MIR6724-2-201ENST00000616483 92 ntBASIC18.87■□□□□ 0.61
ZNF561Q8N587 MIR6724-4-201ENST00000617390 92 ntBASIC18.87■□□□□ 0.61
ZNF561Q8N587 MIR6724-3-201ENST00000622482 92 ntBASIC18.87■□□□□ 0.61
ZNF561Q8N587 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF561Q8N587 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF561Q8N587 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ZNF561Q8N587 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF561Q8N587 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF561Q8N587 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ZNF561Q8N587 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
ZNF561Q8N587 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF561Q8N587 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF561Q8N587 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF561Q8N587 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF561Q8N587 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF561Q8N587 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ZNF561Q8N587 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF561Q8N587 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF561Q8N587 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF561Q8N587 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF561Q8N587 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF561Q8N587 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ZNF561Q8N587 PKD1P6-201ENST00000343738 4769 ntBASIC18.86■□□□□ 0.61
ZNF561Q8N587 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF561Q8N587 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ZNF561Q8N587 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF561Q8N587 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF561Q8N587 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF561Q8N587 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF561Q8N587 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF561Q8N587 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF561Q8N587 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF561Q8N587 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF561Q8N587 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ZNF561Q8N587 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ZNF561Q8N587 AL117328.2-201ENST00000624617 1940 ntBASIC18.85■□□□□ 0.61
ZNF561Q8N587 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF561Q8N587 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF561Q8N587 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF561Q8N587 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF561Q8N587 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.85■□□□□ 0.61
ZNF561Q8N587 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ZNF561Q8N587 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
ZNF561Q8N587 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF561Q8N587 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.84■□□□□ 0.61
ZNF561Q8N587 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF561Q8N587 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF561Q8N587 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
ZNF561Q8N587 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF561Q8N587 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.84■□□□□ 0.61
ZNF561Q8N587 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF561Q8N587 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF561Q8N587 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.83■□□□□ 0.61
ZNF561Q8N587 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF561Q8N587 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF561Q8N587 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
ZNF561Q8N587 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF561Q8N587 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.83■□□□□ 0.6
ZNF561Q8N587 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.83■□□□□ 0.6
ZNF561Q8N587 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.83■□□□□ 0.6
ZNF561Q8N587 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ZNF561Q8N587 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ZNF561Q8N587 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF561Q8N587 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ZNF561Q8N587 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF561Q8N587 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF561Q8N587 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms