Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
CCDC146Q8IYE0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CCDC146Q8IYE0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
CCDC146Q8IYE0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CCDC146Q8IYE0 DUSP8P3-201ENST00000399571 1760 ntBASIC29.64■■■□□ 2.34
CCDC146Q8IYE0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
CCDC146Q8IYE0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC146Q8IYE0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC146Q8IYE0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.63■■■□□ 2.33
CCDC146Q8IYE0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC29.63■■■□□ 2.33
CCDC146Q8IYE0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC29.63■■■□□ 2.33
CCDC146Q8IYE0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
CCDC146Q8IYE0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC29.63■■■□□ 2.33
CCDC146Q8IYE0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC146Q8IYE0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC146Q8IYE0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC146Q8IYE0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC146Q8IYE0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC29.62■■■□□ 2.33
CCDC146Q8IYE0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC146Q8IYE0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
CCDC146Q8IYE0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC29.62■■■□□ 2.33
CCDC146Q8IYE0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC146Q8IYE0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC29.62■■■□□ 2.33
CCDC146Q8IYE0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
CCDC146Q8IYE0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC146Q8IYE0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC146Q8IYE0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC29.61■■■□□ 2.33
CCDC146Q8IYE0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC146Q8IYE0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC29.61■■■□□ 2.33
CCDC146Q8IYE0 AC009086.3-201ENST00000623486 1008 ntBASIC29.61■■■□□ 2.33
CCDC146Q8IYE0 LINC01529-204ENST00000636474 1715 ntBASIC29.61■■■□□ 2.33
CCDC146Q8IYE0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC146Q8IYE0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
CCDC146Q8IYE0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC146Q8IYE0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29.61■■■□□ 2.33
CCDC146Q8IYE0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
CCDC146Q8IYE0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC146Q8IYE0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC146Q8IYE0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC29.6■■■□□ 2.33
CCDC146Q8IYE0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.6■■■□□ 2.33
CCDC146Q8IYE0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC146Q8IYE0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
CCDC146Q8IYE0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC146Q8IYE0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
CCDC146Q8IYE0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.6■■■□□ 2.33
CCDC146Q8IYE0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC146Q8IYE0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC146Q8IYE0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CCDC146Q8IYE0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CCDC146Q8IYE0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC29.59■■■□□ 2.33
CCDC146Q8IYE0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CCDC146Q8IYE0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.59■■■□□ 2.33
CCDC146Q8IYE0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CCDC146Q8IYE0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
CCDC146Q8IYE0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC29.58■■■□□ 2.33
CCDC146Q8IYE0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC146Q8IYE0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.58■■■□□ 2.33
CCDC146Q8IYE0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC146Q8IYE0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC29.58■■■□□ 2.33
CCDC146Q8IYE0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC29.58■■■□□ 2.33
CCDC146Q8IYE0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC29.58■■■□□ 2.33
CCDC146Q8IYE0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC146Q8IYE0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC146Q8IYE0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CCDC146Q8IYE0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
CCDC146Q8IYE0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CCDC146Q8IYE0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CCDC146Q8IYE0 FP325331.1-202ENST00000623531 1380 ntBASIC29.57■■■□□ 2.32
CCDC146Q8IYE0 DUX4L4-201ENST00000566884 1269 ntBASIC29.57■■■□□ 2.32
CCDC146Q8IYE0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC29.57■■■□□ 2.32
CCDC146Q8IYE0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CCDC146Q8IYE0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CCDC146Q8IYE0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CCDC146Q8IYE0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CCDC146Q8IYE0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CCDC146Q8IYE0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
CCDC146Q8IYE0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
CCDC146Q8IYE0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC29.56■■■□□ 2.32
CCDC146Q8IYE0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CCDC146Q8IYE0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC29.56■■■□□ 2.32
CCDC146Q8IYE0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
CCDC146Q8IYE0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
CCDC146Q8IYE0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC29.56■■■□□ 2.32
CCDC146Q8IYE0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
CCDC146Q8IYE0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC29.55■■■□□ 2.32
CCDC146Q8IYE0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC29.55■■■□□ 2.32
CCDC146Q8IYE0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CCDC146Q8IYE0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
CCDC146Q8IYE0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
CCDC146Q8IYE0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC29.54■■■□□ 2.32
CCDC146Q8IYE0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CCDC146Q8IYE0 SERBP1P1-201ENST00000396021 1160 ntBASIC29.54■■■□□ 2.32
CCDC146Q8IYE0 pRNA.6-201ENST00000610482 90 ntBASIC29.54■■■□□ 2.32
CCDC146Q8IYE0 pRNA.5-201ENST00000612139 90 ntBASIC29.54■■■□□ 2.32
CCDC146Q8IYE0 pRNA.11-201ENST00000618423 90 ntBASIC29.54■■■□□ 2.32
CCDC146Q8IYE0 pRNA.13-201ENST00000619112 90 ntBASIC29.54■■■□□ 2.32
CCDC146Q8IYE0 AC241377.3-202ENST00000626088 1088 ntBASIC29.54■■■□□ 2.32
CCDC146Q8IYE0 AC241585.3-202ENST00000628937 1088 ntBASIC29.54■■■□□ 2.32
CCDC146Q8IYE0 AC245100.8-202ENST00000629247 1058 ntBASIC29.54■■■□□ 2.32
CCDC146Q8IYE0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC29.54■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms