Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AL139246.5-201ENST00000606645 996 ntBASIC20.89■□□□□ 0.93
CCDC71Q8IV32 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC71Q8IV32 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CCDC71Q8IV32 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC71Q8IV32 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC71Q8IV32 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC71Q8IV32 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC71Q8IV32 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC71Q8IV32 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC71Q8IV32 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC71Q8IV32 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC71Q8IV32 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC71Q8IV32 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCDC71Q8IV32 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC71Q8IV32 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC71Q8IV32 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC71Q8IV32 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC71Q8IV32 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC71Q8IV32 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC71Q8IV32 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC71Q8IV32 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC71Q8IV32 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC71Q8IV32 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 AL356740.2-201ENST00000601559 647 ntBASIC20.87■□□□□ 0.93
CCDC71Q8IV32 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC71Q8IV32 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC71Q8IV32 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC71Q8IV32 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.86■□□□□ 0.93
CCDC71Q8IV32 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC71Q8IV32 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC71Q8IV32 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC71Q8IV32 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CCDC71Q8IV32 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.86■□□□□ 0.93
CCDC71Q8IV32 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC71Q8IV32 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.86■□□□□ 0.93
CCDC71Q8IV32 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC71Q8IV32 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC71Q8IV32 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC71Q8IV32 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71Q8IV32 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71Q8IV32 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71Q8IV32 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71Q8IV32 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71Q8IV32 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71Q8IV32 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71Q8IV32 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC71Q8IV32 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC71Q8IV32 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
CCDC71Q8IV32 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71Q8IV32 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71Q8IV32 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71Q8IV32 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC71Q8IV32 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC71Q8IV32 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC71Q8IV32 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC71Q8IV32 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC71Q8IV32 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CCDC71Q8IV32 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC71Q8IV32 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC71Q8IV32 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CCDC71Q8IV32 AF131216.4-201ENST00000638924 1588 ntBASIC20.84■□□□□ 0.93
CCDC71Q8IV32 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC71Q8IV32 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC71Q8IV32 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC71Q8IV32 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC71Q8IV32 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC71Q8IV32 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CCDC71Q8IV32 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC71Q8IV32 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CCDC71Q8IV32 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC71Q8IV32 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC71Q8IV32 ECEL1P1-201ENST00000373592 1742 ntBASIC20.83■□□□□ 0.92
CCDC71Q8IV32 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC71Q8IV32 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC71Q8IV32 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC71Q8IV32 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC71Q8IV32 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC71Q8IV32 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC71Q8IV32 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC71Q8IV32 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC71Q8IV32 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.82■□□□□ 0.92
CCDC71Q8IV32 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC71Q8IV32 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC71Q8IV32 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC71Q8IV32 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC71Q8IV32 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms