Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC28.51■■■□□ 2.15
COL23A1Q86Y22 CD99P1-205ENST00000527459 561 ntBASIC28.51■■■□□ 2.15
COL23A1Q86Y22 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
COL23A1Q86Y22 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.51■■■□□ 2.15
COL23A1Q86Y22 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.51■■■□□ 2.15
COL23A1Q86Y22 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
COL23A1Q86Y22 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
COL23A1Q86Y22 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
COL23A1Q86Y22 TSPY20P-201ENST00000450910 630 ntBASIC28.5■■■□□ 2.15
COL23A1Q86Y22 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
COL23A1Q86Y22 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC28.5■■■□□ 2.15
COL23A1Q86Y22 WT1-AS_3.1-201ENST00000613262 234 ntBASIC28.5■■■□□ 2.15
COL23A1Q86Y22 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC28.5■■■□□ 2.15
COL23A1Q86Y22 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC28.5■■■□□ 2.15
COL23A1Q86Y22 ALDH1A3-203ENST00000557963 1670 ntBASIC28.5■■■□□ 2.15
COL23A1Q86Y22 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
COL23A1Q86Y22 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
COL23A1Q86Y22 AL161729.1-201ENST00000604104 1402 ntBASIC28.49■■■□□ 2.15
COL23A1Q86Y22 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
COL23A1Q86Y22 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
COL23A1Q86Y22 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL23A1Q86Y22 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL23A1Q86Y22 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL23A1Q86Y22 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL23A1Q86Y22 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC28.48■■■□□ 2.15
COL23A1Q86Y22 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL23A1Q86Y22 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC28.48■■■□□ 2.15
COL23A1Q86Y22 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL23A1Q86Y22 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL23A1Q86Y22 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.47■■■□□ 2.15
COL23A1Q86Y22 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL23A1Q86Y22 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC28.47■■■□□ 2.15
COL23A1Q86Y22 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC28.47■■■□□ 2.15
COL23A1Q86Y22 AC092803.2-201ENST00000564287 1899 ntBASIC28.47■■■□□ 2.15
COL23A1Q86Y22 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.47■■■□□ 2.15
COL23A1Q86Y22 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL23A1Q86Y22 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC28.47■■■□□ 2.15
COL23A1Q86Y22 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL23A1Q86Y22 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL23A1Q86Y22 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL23A1Q86Y22 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
COL23A1Q86Y22 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
COL23A1Q86Y22 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC28.46■■■□□ 2.15
COL23A1Q86Y22 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC28.45■■■□□ 2.15
COL23A1Q86Y22 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
COL23A1Q86Y22 MFF-208ENST00000409616 1247 ntTSL 5 BASIC28.45■■■□□ 2.14
COL23A1Q86Y22 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
COL23A1Q86Y22 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
COL23A1Q86Y22 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC28.44■■■□□ 2.14
COL23A1Q86Y22 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL23A1Q86Y22 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL23A1Q86Y22 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL23A1Q86Y22 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC28.44■■■□□ 2.14
COL23A1Q86Y22 MIR663A-201ENST00000385250 93 ntBASIC28.44■■■□□ 2.14
COL23A1Q86Y22 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COL23A1Q86Y22 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC28.44■■■□□ 2.14
COL23A1Q86Y22 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC28.44■■■□□ 2.14
COL23A1Q86Y22 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC28.44■■■□□ 2.14
COL23A1Q86Y22 GAMT-205ENST00000640762 751 ntTSL 5 BASIC28.44■■■□□ 2.14
COL23A1Q86Y22 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL23A1Q86Y22 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
COL23A1Q86Y22 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
COL23A1Q86Y22 GPX1P1-201ENST00000388829 606 ntBASIC28.43■■■□□ 2.14
COL23A1Q86Y22 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL23A1Q86Y22 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
COL23A1Q86Y22 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
COL23A1Q86Y22 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC28.43■■■□□ 2.14
COL23A1Q86Y22 EI24-204ENST00000527235 1625 ntTSL 5 BASIC28.43■■■□□ 2.14
COL23A1Q86Y22 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.43■■■□□ 2.14
COL23A1Q86Y22 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
COL23A1Q86Y22 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL23A1Q86Y22 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL23A1Q86Y22 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
COL23A1Q86Y22 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL23A1Q86Y22 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
COL23A1Q86Y22 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
COL23A1Q86Y22 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC28.42■■■□□ 2.14
COL23A1Q86Y22 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC28.42■■■□□ 2.14
COL23A1Q86Y22 APTR-205ENST00000447009 902 ntTSL 2 BASIC28.42■■■□□ 2.14
COL23A1Q86Y22 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC28.42■■■□□ 2.14
COL23A1Q86Y22 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
COL23A1Q86Y22 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
COL23A1Q86Y22 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
COL23A1Q86Y22 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.41■■■□□ 2.14
COL23A1Q86Y22 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.41■■■□□ 2.14
COL23A1Q86Y22 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
COL23A1Q86Y22 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC28.41■■■□□ 2.14
COL23A1Q86Y22 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
COL23A1Q86Y22 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
COL23A1Q86Y22 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC28.4■■■□□ 2.14
COL23A1Q86Y22 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL23A1Q86Y22 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
COL23A1Q86Y22 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC28.4■■■□□ 2.14
COL23A1Q86Y22 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL23A1Q86Y22 METTL26-203ENST00000397664 604 ntTSL 2 BASIC28.4■■■□□ 2.14
COL23A1Q86Y22 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
COL23A1Q86Y22 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
COL23A1Q86Y22 DUX4L4-201ENST00000566884 1269 ntBASIC28.4■■■□□ 2.14
COL23A1Q86Y22 AC011767.1-201ENST00000617410 1153 ntBASIC28.4■■■□□ 2.14
COL23A1Q86Y22 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms