Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZNF546Q86UE3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.52■□□□□ 0.55
ZNF546Q86UE3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ZNF546Q86UE3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF546Q86UE3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF546Q86UE3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF546Q86UE3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF546Q86UE3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF546Q86UE3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF546Q86UE3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF546Q86UE3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF546Q86UE3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF546Q86UE3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF546Q86UE3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF546Q86UE3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ZNF546Q86UE3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF546Q86UE3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF546Q86UE3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF546Q86UE3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ZNF546Q86UE3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.49■□□□□ 0.55
ZNF546Q86UE3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF546Q86UE3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF546Q86UE3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF546Q86UE3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF546Q86UE3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF546Q86UE3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF546Q86UE3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
ZNF546Q86UE3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF546Q86UE3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ZNF546Q86UE3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ZNF546Q86UE3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF546Q86UE3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF546Q86UE3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF546Q86UE3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF546Q86UE3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF546Q86UE3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF546Q86UE3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF546Q86UE3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF546Q86UE3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF546Q86UE3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF546Q86UE3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF546Q86UE3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF546Q86UE3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF546Q86UE3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF546Q86UE3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF546Q86UE3 RNF165-205ENST00000588679 2904 ntBASIC18.47■□□□□ 0.55
ZNF546Q86UE3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF546Q86UE3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.47■□□□□ 0.55
ZNF546Q86UE3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 AL161729.1-201ENST00000604104 1402 ntBASIC18.46■□□□□ 0.55
ZNF546Q86UE3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF546Q86UE3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ZNF546Q86UE3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ZNF546Q86UE3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF546Q86UE3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF546Q86UE3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ZNF546Q86UE3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF546Q86UE3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.45■□□□□ 0.54
ZNF546Q86UE3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF546Q86UE3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF546Q86UE3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF546Q86UE3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF546Q86UE3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.45■□□□□ 0.54
ZNF546Q86UE3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZNF546Q86UE3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF546Q86UE3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms