Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CHMP1BQ7LBR1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP1BQ7LBR1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP1BQ7LBR1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMP1BQ7LBR1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP1BQ7LBR1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP1BQ7LBR1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CHMP1BQ7LBR1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CHMP1BQ7LBR1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMP1BQ7LBR1 AL512631.2-201ENST00000604634 923 ntBASIC20.4■□□□□ 0.86
CHMP1BQ7LBR1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP1BQ7LBR1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP1BQ7LBR1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMP1BQ7LBR1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.39■□□□□ 0.86
CHMP1BQ7LBR1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CHMP1BQ7LBR1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.39■□□□□ 0.85
CHMP1BQ7LBR1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP1BQ7LBR1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.39■□□□□ 0.85
CHMP1BQ7LBR1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.39■□□□□ 0.85
CHMP1BQ7LBR1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.39■□□□□ 0.85
CHMP1BQ7LBR1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP1BQ7LBR1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP1BQ7LBR1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMP1BQ7LBR1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP1BQ7LBR1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.38■□□□□ 0.85
CHMP1BQ7LBR1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP1BQ7LBR1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP1BQ7LBR1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP1BQ7LBR1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP1BQ7LBR1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.38■□□□□ 0.85
CHMP1BQ7LBR1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP1BQ7LBR1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMP1BQ7LBR1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP1BQ7LBR1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP1BQ7LBR1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP1BQ7LBR1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMP1BQ7LBR1 AC092171.4-201ENST00000609130 632 ntBASIC20.37■□□□□ 0.85
CHMP1BQ7LBR1 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.37■□□□□ 0.85
CHMP1BQ7LBR1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMP1BQ7LBR1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CHMP1BQ7LBR1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP1BQ7LBR1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP1BQ7LBR1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP1BQ7LBR1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 LINC01124-201ENST00000409786 2117 ntBASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP1BQ7LBR1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP1BQ7LBR1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.34■□□□□ 0.85
CHMP1BQ7LBR1 AC141586.4-201ENST00000624558 1573 ntBASIC20.34■□□□□ 0.85
CHMP1BQ7LBR1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CHMP1BQ7LBR1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP1BQ7LBR1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP1BQ7LBR1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP1BQ7LBR1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
CHMP1BQ7LBR1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.34■□□□□ 0.85
CHMP1BQ7LBR1 AL139246.5-201ENST00000606645 996 ntBASIC20.34■□□□□ 0.85
CHMP1BQ7LBR1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.34■□□□□ 0.85
CHMP1BQ7LBR1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP1BQ7LBR1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CHMP1BQ7LBR1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP1BQ7LBR1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP1BQ7LBR1 AC096631.2-201ENST00000436136 790 ntBASIC20.33■□□□□ 0.85
CHMP1BQ7LBR1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.33■□□□□ 0.85
CHMP1BQ7LBR1 DUX4L19-201ENST00000557448 1267 ntBASIC20.33■□□□□ 0.85
CHMP1BQ7LBR1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CHMP1BQ7LBR1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.33■□□□□ 0.84
CHMP1BQ7LBR1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHMP1BQ7LBR1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
CHMP1BQ7LBR1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CHMP1BQ7LBR1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms