Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC25.17■■□□□ 1.62
PPP4R3CPQ6ZMV5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PPP4R3CPQ6ZMV5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.17■■□□□ 1.62
PPP4R3CPQ6ZMV5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
PPP4R3CPQ6ZMV5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.17■■□□□ 1.62
PPP4R3CPQ6ZMV5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
PPP4R3CPQ6ZMV5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PPP4R3CPQ6ZMV5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PPP4R3CPQ6ZMV5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PPP4R3CPQ6ZMV5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.16■■□□□ 1.62
PPP4R3CPQ6ZMV5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.16■■□□□ 1.62
PPP4R3CPQ6ZMV5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PPP4R3CPQ6ZMV5 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PPP4R3CPQ6ZMV5 AL512631.2-201ENST00000604634 923 ntBASIC25.16■■□□□ 1.62
PPP4R3CPQ6ZMV5 AC090950.1-202ENST00000605733 644 ntBASIC25.16■■□□□ 1.62
PPP4R3CPQ6ZMV5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.15■■□□□ 1.62
PPP4R3CPQ6ZMV5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R3CPQ6ZMV5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R3CPQ6ZMV5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R3CPQ6ZMV5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R3CPQ6ZMV5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R3CPQ6ZMV5 PSMC1P2-201ENST00000423961 1204 ntBASIC25.15■■□□□ 1.62
PPP4R3CPQ6ZMV5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.15■■□□□ 1.62
PPP4R3CPQ6ZMV5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R3CPQ6ZMV5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
PPP4R3CPQ6ZMV5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R3CPQ6ZMV5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PPP4R3CPQ6ZMV5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 MTND2P9-201ENST00000422293 931 ntBASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 RSL24D1P2-201ENST00000445584 366 ntBASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.14■■□□□ 1.62
PPP4R3CPQ6ZMV5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.14■■□□□ 1.61
PPP4R3CPQ6ZMV5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PPP4R3CPQ6ZMV5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
PPP4R3CPQ6ZMV5 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.14■■□□□ 1.61
PPP4R3CPQ6ZMV5 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.14■■□□□ 1.61
PPP4R3CPQ6ZMV5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PPP4R3CPQ6ZMV5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.14■■□□□ 1.61
PPP4R3CPQ6ZMV5 AC005703.6-201ENST00000623265 1329 ntBASIC25.13■■□□□ 1.61
PPP4R3CPQ6ZMV5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R3CPQ6ZMV5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
PPP4R3CPQ6ZMV5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R3CPQ6ZMV5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R3CPQ6ZMV5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R3CPQ6ZMV5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R3CPQ6ZMV5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.13■■□□□ 1.61
PPP4R3CPQ6ZMV5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.13■■□□□ 1.61
PPP4R3CPQ6ZMV5 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.13■■□□□ 1.61
PPP4R3CPQ6ZMV5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R3CPQ6ZMV5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PPP4R3CPQ6ZMV5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4R3CPQ6ZMV5 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC25.12■■□□□ 1.61
PPP4R3CPQ6ZMV5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4R3CPQ6ZMV5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PPP4R3CPQ6ZMV5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.12■■□□□ 1.61
PPP4R3CPQ6ZMV5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 ALDH1A3-203ENST00000557963 1670 ntBASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 MIR4466-201ENST00000606121 54 ntBASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC25.11■■□□□ 1.61
PPP4R3CPQ6ZMV5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R3CPQ6ZMV5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R3CPQ6ZMV5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R3CPQ6ZMV5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.1■■□□□ 1.61
PPP4R3CPQ6ZMV5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.1■■□□□ 1.61
PPP4R3CPQ6ZMV5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R3CPQ6ZMV5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R3CPQ6ZMV5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R3CPQ6ZMV5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.1■■□□□ 1.61
PPP4R3CPQ6ZMV5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R3CPQ6ZMV5 AC016180.1-201ENST00000567945 403 ntBASIC25.1■■□□□ 1.61
PPP4R3CPQ6ZMV5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPP4R3CPQ6ZMV5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms