Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CTR9Q6PD62 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CTR9Q6PD62 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CTR9Q6PD62 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.57■■□□□ 1.84
CTR9Q6PD62 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.57■■□□□ 1.84
CTR9Q6PD62 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.57■■□□□ 1.84
CTR9Q6PD62 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.57■■□□□ 1.84
CTR9Q6PD62 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CTR9Q6PD62 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CTR9Q6PD62 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.57■■□□□ 1.84
CTR9Q6PD62 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.56■■□□□ 1.84
CTR9Q6PD62 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.56■■□□□ 1.84
CTR9Q6PD62 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CTR9Q6PD62 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CTR9Q6PD62 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CTR9Q6PD62 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.56■■□□□ 1.84
CTR9Q6PD62 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.56■■□□□ 1.84
CTR9Q6PD62 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.56■■□□□ 1.84
CTR9Q6PD62 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.55■■□□□ 1.84
CTR9Q6PD62 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CTR9Q6PD62 AC093323.1-202ENST00000635031 2045 ntBASIC26.55■■□□□ 1.84
CTR9Q6PD62 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.55■■□□□ 1.84
CTR9Q6PD62 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.55■■□□□ 1.84
CTR9Q6PD62 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.55■■□□□ 1.84
CTR9Q6PD62 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
CTR9Q6PD62 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CTR9Q6PD62 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CTR9Q6PD62 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CTR9Q6PD62 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CTR9Q6PD62 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CTR9Q6PD62 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CTR9Q6PD62 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
CTR9Q6PD62 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CTR9Q6PD62 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CTR9Q6PD62 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.54■■□□□ 1.84
CTR9Q6PD62 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.54■■□□□ 1.84
CTR9Q6PD62 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
CTR9Q6PD62 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CTR9Q6PD62 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.53■■□□□ 1.84
CTR9Q6PD62 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.53■■□□□ 1.84
CTR9Q6PD62 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.53■■□□□ 1.84
CTR9Q6PD62 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.53■■□□□ 1.84
CTR9Q6PD62 AC133637.1-201ENST00000624115 1537 ntBASIC26.53■■□□□ 1.84
CTR9Q6PD62 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.53■■□□□ 1.84
CTR9Q6PD62 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CTR9Q6PD62 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CTR9Q6PD62 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CTR9Q6PD62 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.53■■□□□ 1.84
CTR9Q6PD62 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CTR9Q6PD62 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CTR9Q6PD62 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CTR9Q6PD62 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CTR9Q6PD62 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CTR9Q6PD62 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CTR9Q6PD62 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
CTR9Q6PD62 ZNRF2P3-201ENST00000424200 374 ntBASIC26.52■■□□□ 1.84
CTR9Q6PD62 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
CTR9Q6PD62 AC008764.7-201ENST00000593779 1081 ntBASIC26.52■■□□□ 1.84
CTR9Q6PD62 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
CTR9Q6PD62 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CTR9Q6PD62 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
CTR9Q6PD62 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.51■■□□□ 1.84
CTR9Q6PD62 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CTR9Q6PD62 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CTR9Q6PD62 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CTR9Q6PD62 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
CTR9Q6PD62 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CTR9Q6PD62 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.51■■□□□ 1.83
CTR9Q6PD62 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CTR9Q6PD62 AC091305.1-201ENST00000479476 895 ntBASIC26.51■■□□□ 1.83
CTR9Q6PD62 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.51■■□□□ 1.83
CTR9Q6PD62 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CTR9Q6PD62 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.51■■□□□ 1.83
CTR9Q6PD62 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.51■■□□□ 1.83
CTR9Q6PD62 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
CTR9Q6PD62 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
CTR9Q6PD62 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CTR9Q6PD62 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.5■■□□□ 1.83
CTR9Q6PD62 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CTR9Q6PD62 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CTR9Q6PD62 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CTR9Q6PD62 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CTR9Q6PD62 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CTR9Q6PD62 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CTR9Q6PD62 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.49■■□□□ 1.83
CTR9Q6PD62 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CTR9Q6PD62 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CTR9Q6PD62 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CTR9Q6PD62 AC099791.1-201ENST00000416440 715 ntBASIC26.49■■□□□ 1.83
CTR9Q6PD62 AC027682.1-201ENST00000562846 899 ntBASIC26.49■■□□□ 1.83
CTR9Q6PD62 CA15P2-201ENST00000611168 834 ntBASIC26.49■■□□□ 1.83
CTR9Q6PD62 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CTR9Q6PD62 AL353803.4-201ENST00000565882 1934 ntBASIC26.49■■□□□ 1.83
CTR9Q6PD62 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CTR9Q6PD62 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CTR9Q6PD62 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CTR9Q6PD62 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
CTR9Q6PD62 RASA4CP-201ENST00000424092 1398 ntBASIC26.48■■□□□ 1.83
CTR9Q6PD62 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
CTR9Q6PD62 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms