Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDCP2Q5VXM1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCP2Q5VXM1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.41■■□□□ 1.02
CDCP2Q5VXM1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDCP2Q5VXM1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCP2Q5VXM1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.41■■□□□ 1.02
CDCP2Q5VXM1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.4■■□□□ 1.02
CDCP2Q5VXM1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDCP2Q5VXM1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCP2Q5VXM1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CDCP2Q5VXM1 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.4■■□□□ 1.02
CDCP2Q5VXM1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDCP2Q5VXM1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCP2Q5VXM1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDCP2Q5VXM1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.4■■□□□ 1.02
CDCP2Q5VXM1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCP2Q5VXM1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDCP2Q5VXM1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CDCP2Q5VXM1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.39■■□□□ 1.02
CDCP2Q5VXM1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDCP2Q5VXM1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDCP2Q5VXM1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.39■■□□□ 1.01
CDCP2Q5VXM1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.39■■□□□ 1.01
CDCP2Q5VXM1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.39■■□□□ 1.01
CDCP2Q5VXM1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CDCP2Q5VXM1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDCP2Q5VXM1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CDCP2Q5VXM1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDCP2Q5VXM1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCP2Q5VXM1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 AC105233.4-201ENST00000642045 216 ntBASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCP2Q5VXM1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCP2Q5VXM1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCP2Q5VXM1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CDCP2Q5VXM1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.36■■□□□ 1.01
CDCP2Q5VXM1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.36■■□□□ 1.01
CDCP2Q5VXM1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.36■■□□□ 1.01
CDCP2Q5VXM1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCP2Q5VXM1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.36■■□□□ 1.01
CDCP2Q5VXM1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.36■■□□□ 1.01
CDCP2Q5VXM1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.36■■□□□ 1.01
CDCP2Q5VXM1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCP2Q5VXM1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.36■■□□□ 1.01
CDCP2Q5VXM1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDCP2Q5VXM1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCP2Q5VXM1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CDCP2Q5VXM1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CDCP2Q5VXM1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDCP2Q5VXM1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.35■■□□□ 1.01
CDCP2Q5VXM1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.35■■□□□ 1.01
CDCP2Q5VXM1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDCP2Q5VXM1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDCP2Q5VXM1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 AC006015.1-201ENST00000429970 570 ntBASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 KRT18P61-201ENST00000585825 1298 ntBASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDCP2Q5VXM1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.33■■□□□ 1.01
CDCP2Q5VXM1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CDCP2Q5VXM1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms