Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEF9Q5VWM5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.54■■□□□ 1.04
PRAMEF9Q5VWM5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.54■■□□□ 1.04
PRAMEF9Q5VWM5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEF9Q5VWM5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF9Q5VWM5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF9Q5VWM5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF9Q5VWM5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PRAMEF9Q5VWM5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF9Q5VWM5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF9Q5VWM5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.53■■□□□ 1.04
PRAMEF9Q5VWM5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF9Q5VWM5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF9Q5VWM5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF9Q5VWM5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.53■■□□□ 1.04
PRAMEF9Q5VWM5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.53■■□□□ 1.04
PRAMEF9Q5VWM5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF9Q5VWM5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF9Q5VWM5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PRAMEF9Q5VWM5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PRAMEF9Q5VWM5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRAMEF9Q5VWM5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRAMEF9Q5VWM5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRAMEF9Q5VWM5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.52■■□□□ 1.04
PRAMEF9Q5VWM5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEF9Q5VWM5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.51■■□□□ 1.03
PRAMEF9Q5VWM5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEF9Q5VWM5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.51■■□□□ 1.03
PRAMEF9Q5VWM5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEF9Q5VWM5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.51■■□□□ 1.03
PRAMEF9Q5VWM5 C17orf82-201ENST00000623772 1530 ntBASIC21.51■■□□□ 1.03
PRAMEF9Q5VWM5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEF9Q5VWM5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PRAMEF9Q5VWM5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.51■■□□□ 1.03
PRAMEF9Q5VWM5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEF9Q5VWM5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.51■■□□□ 1.03
PRAMEF9Q5VWM5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEF9Q5VWM5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRAMEF9Q5VWM5 LINC01529-204ENST00000636474 1715 ntBASIC21.5■■□□□ 1.03
PRAMEF9Q5VWM5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRAMEF9Q5VWM5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PRAMEF9Q5VWM5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRAMEF9Q5VWM5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.5■■□□□ 1.03
PRAMEF9Q5VWM5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRAMEF9Q5VWM5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRAMEF9Q5VWM5 FP325331.1-202ENST00000623531 1380 ntBASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PRAMEF9Q5VWM5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.48■■□□□ 1.03
PRAMEF9Q5VWM5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.48■■□□□ 1.03
PRAMEF9Q5VWM5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PRAMEF9Q5VWM5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRAMEF9Q5VWM5 AL117332.1-201ENST00000622628 974 ntBASIC21.48■■□□□ 1.03
PRAMEF9Q5VWM5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRAMEF9Q5VWM5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF9Q5VWM5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF9Q5VWM5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF9Q5VWM5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.47■■□□□ 1.03
PRAMEF9Q5VWM5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.47■■□□□ 1.03
PRAMEF9Q5VWM5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF9Q5VWM5 DUX4L4-201ENST00000566884 1269 ntBASIC21.47■■□□□ 1.03
PRAMEF9Q5VWM5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF9Q5VWM5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF9Q5VWM5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF9Q5VWM5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.47■■□□□ 1.03
PRAMEF9Q5VWM5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.47■■□□□ 1.03
PRAMEF9Q5VWM5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PRAMEF9Q5VWM5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 AL356441.2-201ENST00000443009 864 ntBASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 MIR3621-201ENST00000580529 85 ntBASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRAMEF9Q5VWM5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PRAMEF9Q5VWM5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PRAMEF9Q5VWM5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
PRAMEF9Q5VWM5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.45■■□□□ 1.02
PRAMEF9Q5VWM5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.45■■□□□ 1.02
PRAMEF9Q5VWM5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms