Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01556Q5JQF7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LINC01556Q5JQF7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC01556Q5JQF7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC01556Q5JQF7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC01556Q5JQF7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LINC01556Q5JQF7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
LINC01556Q5JQF7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01556Q5JQF7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC01556Q5JQF7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LINC01556Q5JQF7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
LINC01556Q5JQF7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LINC01556Q5JQF7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC01556Q5JQF7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01556Q5JQF7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 AC006455.2-201ENST00000429931 906 ntBASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 AL499627.2-201ENST00000606283 725 ntBASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LINC01556Q5JQF7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 DUSP8P3-201ENST00000399571 1760 ntBASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 pRNA.6-201ENST00000610482 90 ntBASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 pRNA.5-201ENST00000612139 90 ntBASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 AC011298.3-201ENST00000615796 283 ntBASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 pRNA.11-201ENST00000618423 90 ntBASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 pRNA.13-201ENST00000619112 90 ntBASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC01556Q5JQF7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 DUSP8P5-201ENST00000422884 1815 ntBASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 SERBP1P1-201ENST00000396021 1160 ntBASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 MIR3181-201ENST00000578512 73 ntBASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01556Q5JQF7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01556Q5JQF7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
LINC01556Q5JQF7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms