Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
FNDC3BQ53EP0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
FNDC3BQ53EP0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.66■■□□□ 1.22
FNDC3BQ53EP0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
FNDC3BQ53EP0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FNDC3BQ53EP0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FNDC3BQ53EP0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FNDC3BQ53EP0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.65■■□□□ 1.22
FNDC3BQ53EP0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FNDC3BQ53EP0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FNDC3BQ53EP0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
FNDC3BQ53EP0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FNDC3BQ53EP0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.65■■□□□ 1.22
FNDC3BQ53EP0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FNDC3BQ53EP0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
FNDC3BQ53EP0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
FNDC3BQ53EP0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
FNDC3BQ53EP0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
FNDC3BQ53EP0 TSPY26P-201ENST00000476365 1326 ntBASIC22.64■■□□□ 1.22
FNDC3BQ53EP0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FNDC3BQ53EP0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
FNDC3BQ53EP0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FNDC3BQ53EP0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.64■■□□□ 1.21
FNDC3BQ53EP0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.64■■□□□ 1.21
FNDC3BQ53EP0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.64■■□□□ 1.21
FNDC3BQ53EP0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FNDC3BQ53EP0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.64■■□□□ 1.21
FNDC3BQ53EP0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FNDC3BQ53EP0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.63■■□□□ 1.21
FNDC3BQ53EP0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
FNDC3BQ53EP0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FNDC3BQ53EP0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FNDC3BQ53EP0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.63■■□□□ 1.21
FNDC3BQ53EP0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
FNDC3BQ53EP0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.62■■□□□ 1.21
FNDC3BQ53EP0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FNDC3BQ53EP0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FNDC3BQ53EP0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FNDC3BQ53EP0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.62■■□□□ 1.21
FNDC3BQ53EP0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
FNDC3BQ53EP0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.62■■□□□ 1.21
FNDC3BQ53EP0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.62■■□□□ 1.21
FNDC3BQ53EP0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FNDC3BQ53EP0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FNDC3BQ53EP0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
FNDC3BQ53EP0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.61■■□□□ 1.21
FNDC3BQ53EP0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
FNDC3BQ53EP0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
FNDC3BQ53EP0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.61■■□□□ 1.21
FNDC3BQ53EP0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
FNDC3BQ53EP0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
FNDC3BQ53EP0 AC010525.1-201ENST00000585559 441 ntBASIC22.61■■□□□ 1.21
FNDC3BQ53EP0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
FNDC3BQ53EP0 MIR6821-201ENST00000617625 74 ntBASIC22.61■■□□□ 1.21
FNDC3BQ53EP0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.61■■□□□ 1.21
FNDC3BQ53EP0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
FNDC3BQ53EP0 ABCB10P4-201ENST00000566803 2184 ntBASIC22.6■■□□□ 1.21
FNDC3BQ53EP0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.6■■□□□ 1.21
FNDC3BQ53EP0 AC097381.1-201ENST00000429019 1296 ntBASIC22.6■■□□□ 1.21
FNDC3BQ53EP0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FNDC3BQ53EP0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.6■■□□□ 1.21
FNDC3BQ53EP0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.6■■□□□ 1.21
FNDC3BQ53EP0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.6■■□□□ 1.21
FNDC3BQ53EP0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
FNDC3BQ53EP0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.6■■□□□ 1.21
FNDC3BQ53EP0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.6■■□□□ 1.21
FNDC3BQ53EP0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
FNDC3BQ53EP0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
FNDC3BQ53EP0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
FNDC3BQ53EP0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 OR2I1P-207ENST00000453522 948 ntBASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 IGHV3-19-201ENST00000521488 291 ntBASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 AC087623.3-201ENST00000607047 1098 ntBASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
FNDC3BQ53EP0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.58■■□□□ 1.21
FNDC3BQ53EP0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.58■■□□□ 1.21
FNDC3BQ53EP0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
FNDC3BQ53EP0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.58■■□□□ 1.21
FNDC3BQ53EP0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.58■■□□□ 1.21
FNDC3BQ53EP0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
FNDC3BQ53EP0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
FNDC3BQ53EP0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.57■■□□□ 1.2
FNDC3BQ53EP0 AC079630.1-202ENST00000618127 1840 ntBASIC22.57■■□□□ 1.2
FNDC3BQ53EP0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FNDC3BQ53EP0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FNDC3BQ53EP0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
FNDC3BQ53EP0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.57■■□□□ 1.2
FNDC3BQ53EP0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
FNDC3BQ53EP0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FNDC3BQ53EP0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms