Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.79■■□□□ 1.56
TRIM60Q495X7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.79■■□□□ 1.56
TRIM60Q495X7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM60Q495X7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM60Q495X7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM60Q495X7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
TRIM60Q495X7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.78■■□□□ 1.56
TRIM60Q495X7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.78■■□□□ 1.56
TRIM60Q495X7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.78■■□□□ 1.56
TRIM60Q495X7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM60Q495X7 AL355802.2-201ENST00000402069 882 ntBASIC24.78■■□□□ 1.56
TRIM60Q495X7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.78■■□□□ 1.56
TRIM60Q495X7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
TRIM60Q495X7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
TRIM60Q495X7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
TRIM60Q495X7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM60Q495X7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
TRIM60Q495X7 HLA-L-211ENST00000482052 1765 ntBASIC24.77■■□□□ 1.56
TRIM60Q495X7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.77■■□□□ 1.56
TRIM60Q495X7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
TRIM60Q495X7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM60Q495X7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.76■■□□□ 1.55
TRIM60Q495X7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM60Q495X7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.76■■□□□ 1.55
TRIM60Q495X7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.76■■□□□ 1.55
TRIM60Q495X7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM60Q495X7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.76■■□□□ 1.55
TRIM60Q495X7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM60Q495X7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.76■■□□□ 1.55
TRIM60Q495X7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM60Q495X7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM60Q495X7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM60Q495X7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM60Q495X7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM60Q495X7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.75■■□□□ 1.55
TRIM60Q495X7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM60Q495X7 AC006970.2-201ENST00000450065 779 ntBASIC24.75■■□□□ 1.55
TRIM60Q495X7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.75■■□□□ 1.55
TRIM60Q495X7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.75■■□□□ 1.55
TRIM60Q495X7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.75■■□□□ 1.55
TRIM60Q495X7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM60Q495X7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
TRIM60Q495X7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.75■■□□□ 1.55
TRIM60Q495X7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM60Q495X7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM60Q495X7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM60Q495X7 BID-214ENST00000617586 542 ntTSL 5 BASIC24.74■■□□□ 1.55
TRIM60Q495X7 AL109923.1-201ENST00000618799 583 ntBASIC24.74■■□□□ 1.55
TRIM60Q495X7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
TRIM60Q495X7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM60Q495X7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.73■■□□□ 1.55
TRIM60Q495X7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.73■■□□□ 1.55
TRIM60Q495X7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM60Q495X7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM60Q495X7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.73■■□□□ 1.55
TRIM60Q495X7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM60Q495X7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM60Q495X7 CROCCP5-201ENST00000436658 830 ntBASIC24.73■■□□□ 1.55
TRIM60Q495X7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.73■■□□□ 1.55
TRIM60Q495X7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.72■■□□□ 1.55
TRIM60Q495X7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM60Q495X7 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.72■■□□□ 1.55
TRIM60Q495X7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.72■■□□□ 1.55
TRIM60Q495X7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.72■■□□□ 1.55
TRIM60Q495X7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM60Q495X7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.72■■□□□ 1.55
TRIM60Q495X7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM60Q495X7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM60Q495X7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.72■■□□□ 1.55
TRIM60Q495X7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
TRIM60Q495X7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM60Q495X7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.71■■□□□ 1.55
TRIM60Q495X7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM60Q495X7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM60Q495X7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM60Q495X7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM60Q495X7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.71■■□□□ 1.55
TRIM60Q495X7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM60Q495X7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM60Q495X7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM60Q495X7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM60Q495X7 AP004607.4-201ENST00000530158 1459 ntBASIC24.7■■□□□ 1.55
TRIM60Q495X7 AC004854.2-201ENST00000608450 1441 ntBASIC24.7■■□□□ 1.55
TRIM60Q495X7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
TRIM60Q495X7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.7■■□□□ 1.54
TRIM60Q495X7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM60Q495X7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM60Q495X7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.7■■□□□ 1.54
TRIM60Q495X7 TPRG1LP1-201ENST00000598702 760 ntBASIC24.7■■□□□ 1.54
TRIM60Q495X7 TMEM191A-211ENST00000637163 1067 ntBASIC24.7■■□□□ 1.54
TRIM60Q495X7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.7■■□□□ 1.54
TRIM60Q495X7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM60Q495X7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.69■■□□□ 1.54
TRIM60Q495X7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.69■■□□□ 1.54
TRIM60Q495X7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM60Q495X7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM60Q495X7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
TRIM60Q495X7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM60Q495X7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
TRIM60Q495X7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms