Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
DCAF4L1Q3SXM0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DCAF4L1Q3SXM0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DCAF4L1Q3SXM0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
DCAF4L1Q3SXM0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DCAF4L1Q3SXM0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.26■■□□□ 1.47
DCAF4L1Q3SXM0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DCAF4L1Q3SXM0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
DCAF4L1Q3SXM0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
DCAF4L1Q3SXM0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.26■■□□□ 1.47
DCAF4L1Q3SXM0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DCAF4L1Q3SXM0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DCAF4L1Q3SXM0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
DCAF4L1Q3SXM0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
DCAF4L1Q3SXM0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
DCAF4L1Q3SXM0 ZNRF2P3-201ENST00000424200 374 ntBASIC24.25■■□□□ 1.47
DCAF4L1Q3SXM0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.25■■□□□ 1.47
DCAF4L1Q3SXM0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DCAF4L1Q3SXM0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
DCAF4L1Q3SXM0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DCAF4L1Q3SXM0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.25■■□□□ 1.47
DCAF4L1Q3SXM0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DCAF4L1Q3SXM0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DCAF4L1Q3SXM0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
DCAF4L1Q3SXM0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
DCAF4L1Q3SXM0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.24■■□□□ 1.47
DCAF4L1Q3SXM0 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.24■■□□□ 1.47
DCAF4L1Q3SXM0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DCAF4L1Q3SXM0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DCAF4L1Q3SXM0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DCAF4L1Q3SXM0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DCAF4L1Q3SXM0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DCAF4L1Q3SXM0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.23■■□□□ 1.47
DCAF4L1Q3SXM0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
DCAF4L1Q3SXM0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
DCAF4L1Q3SXM0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.23■■□□□ 1.47
DCAF4L1Q3SXM0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
DCAF4L1Q3SXM0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DCAF4L1Q3SXM0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DCAF4L1Q3SXM0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DCAF4L1Q3SXM0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.22■■□□□ 1.47
DCAF4L1Q3SXM0 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.22■■□□□ 1.47
DCAF4L1Q3SXM0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
DCAF4L1Q3SXM0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
DCAF4L1Q3SXM0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
DCAF4L1Q3SXM0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
DCAF4L1Q3SXM0 SLC47A1P1-202ENST00000449666 945 ntBASIC24.22■■□□□ 1.47
DCAF4L1Q3SXM0 OR2I1P-207ENST00000453522 948 ntBASIC24.22■■□□□ 1.47
DCAF4L1Q3SXM0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.22■■□□□ 1.47
DCAF4L1Q3SXM0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.22■■□□□ 1.47
DCAF4L1Q3SXM0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DCAF4L1Q3SXM0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
DCAF4L1Q3SXM0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
DCAF4L1Q3SXM0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DCAF4L1Q3SXM0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.21■■□□□ 1.47
DCAF4L1Q3SXM0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
DCAF4L1Q3SXM0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
DCAF4L1Q3SXM0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
DCAF4L1Q3SXM0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
DCAF4L1Q3SXM0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
DCAF4L1Q3SXM0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DCAF4L1Q3SXM0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
DCAF4L1Q3SXM0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
DCAF4L1Q3SXM0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
DCAF4L1Q3SXM0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DCAF4L1Q3SXM0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.2■■□□□ 1.47
DCAF4L1Q3SXM0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
DCAF4L1Q3SXM0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
DCAF4L1Q3SXM0 MIR935-201ENST00000401179 91 ntBASIC24.2■■□□□ 1.46
DCAF4L1Q3SXM0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.2■■□□□ 1.46
DCAF4L1Q3SXM0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.2■■□□□ 1.46
DCAF4L1Q3SXM0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.2■■□□□ 1.46
DCAF4L1Q3SXM0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
DCAF4L1Q3SXM0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.2■■□□□ 1.46
DCAF4L1Q3SXM0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DCAF4L1Q3SXM0 AL353803.4-201ENST00000565882 1934 ntBASIC24.2■■□□□ 1.46
DCAF4L1Q3SXM0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
DCAF4L1Q3SXM0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
DCAF4L1Q3SXM0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
DCAF4L1Q3SXM0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
DCAF4L1Q3SXM0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.19■■□□□ 1.46
DCAF4L1Q3SXM0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.19■■□□□ 1.46
DCAF4L1Q3SXM0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
DCAF4L1Q3SXM0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
DCAF4L1Q3SXM0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
DCAF4L1Q3SXM0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.18■■□□□ 1.46
DCAF4L1Q3SXM0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
DCAF4L1Q3SXM0 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.18■■□□□ 1.46
DCAF4L1Q3SXM0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.18■■□□□ 1.46
DCAF4L1Q3SXM0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
DCAF4L1Q3SXM0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DCAF4L1Q3SXM0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.17■■□□□ 1.46
DCAF4L1Q3SXM0 AC126544.1-201ENST00000580842 1059 ntBASIC24.17■■□□□ 1.46
DCAF4L1Q3SXM0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
DCAF4L1Q3SXM0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
DCAF4L1Q3SXM0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
DCAF4L1Q3SXM0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DCAF4L1Q3SXM0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
DCAF4L1Q3SXM0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
DCAF4L1Q3SXM0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms