Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 ATG23YLR431C 1362 nt3.57□□□□□ -1.84
HRD1Q08109 RGS2YOR107W 930 nt3.57□□□□□ -1.84
HRD1Q08109 NOC2YOR206W 2133 nt3.57□□□□□ -1.84
HRD1Q08109 SMP1YBR182C 1359 nt3.57□□□□□ -1.84
HRD1Q08109 JHD2YJR119C 2187 nt3.56□□□□□ -1.84
HRD1Q08109 BUD8YLR353W 1812 nt3.56□□□□□ -1.84
HRD1Q08109 CDC6YJL194W 1542 nt3.56□□□□□ -1.84
HRD1Q08109 LAS1YKR063C 1509 nt3.56□□□□□ -1.84
HRD1Q08109 PRP11YDL043C 801 nt3.56□□□□□ -1.84
HRD1Q08109 YLF2YHL014C 1218 nt3.56□□□□□ -1.84
HRD1Q08109 YJR112W-AYJR112W-A 330 nt3.56□□□□□ -1.84
HRD1Q08109 ATG33YLR356W 594 nt3.56□□□□□ -1.84
HRD1Q08109 YMR105W-AYMR105W-A 195 nt3.56□□□□□ -1.84
HRD1Q08109 YPR071WYPR071W 636 nt3.56□□□□□ -1.84
HRD1Q08109 PBN1YCL052C 1251 nt3.56□□□□□ -1.84
HRD1Q08109 NTH1YDR001C 2256 nt3.56□□□□□ -1.84
HRD1Q08109 YDL109CYDL109C 1944 nt3.56□□□□□ -1.84
HRD1Q08109 MCD4YKL165C 2760 nt3.56□□□□□ -1.84
HRD1Q08109 FAR10YLR238W 1437 nt3.55□□□□□ -1.84
HRD1Q08109 PIC2YER053C 903 nt3.55□□□□□ -1.84
HRD1Q08109 tQ(UUG)CtQ(UUG)C 72 nt3.55□□□□□ -1.84
HRD1Q08109 tQ(UUG)D1tQ(UUG)D1 72 nt3.55□□□□□ -1.84
HRD1Q08109 tQ(UUG)D2tQ(UUG)D2 72 nt3.55□□□□□ -1.84
HRD1Q08109 tQ(UUG)D3tQ(UUG)D3 72 nt3.55□□□□□ -1.84
HRD1Q08109 tQ(UUG)E1tQ(UUG)E1 72 nt3.55□□□□□ -1.84
HRD1Q08109 tQ(UUG)HtQ(UUG)H 72 nt3.55□□□□□ -1.84
HRD1Q08109 tQ(UUG)LtQ(UUG)L 72 nt3.55□□□□□ -1.84
HRD1Q08109 YAL056C-AYAL056C-A 351 nt3.55□□□□□ -1.84
HRD1Q08109 NKP2YLR315W 462 nt3.55□□□□□ -1.84
HRD1Q08109 SHE1YBL031W 1017 nt3.55□□□□□ -1.84
HRD1Q08109 MTF1YMR228W 1026 nt3.55□□□□□ -1.84
HRD1Q08109 SPS19YNL202W 879 nt3.55□□□□□ -1.84
HRD1Q08109 SEO1YAL067C 1782 nt3.54□□□□□ -1.84
HRD1Q08109 NPL6YMR091C 1308 nt3.54□□□□□ -1.84
HRD1Q08109 HMLALPHA1YCL066W 528 nt3.54□□□□□ -1.84
HRD1Q08109 MATALPHA1YCR040W 528 nt3.54□□□□□ -1.84
HRD1Q08109 PCL1YNL289W 840 nt3.54□□□□□ -1.84
HRD1Q08109 MRPS9YBR146W 837 nt3.54□□□□□ -1.84
HRD1Q08109 GCR1YPL075W 2358 nt3.54□□□□□ -1.84
HRD1Q08109 VPS73YGL104C 1461 nt3.54□□□□□ -1.84
HRD1Q08109 LAP3YNL239W 1365 nt3.53□□□□□ -1.84
HRD1Q08109 VMA1YDL185W 3216 nt3.53□□□□□ -1.84
HRD1Q08109 LSB1YGR136W 726 nt3.53□□□□□ -1.84
HRD1Q08109 YIL171W-AYIL171W-A 453 nt3.53□□□□□ -1.84
HRD1Q08109 YJL220WYJL220W 453 nt3.53□□□□□ -1.84
HRD1Q08109 SUI1YNL244C 327 nt3.53□□□□□ -1.84
HRD1Q08109 YBR016WYBR016W 387 nt3.53□□□□□ -1.84
HRD1Q08109 ICY2YPL250C 411 nt3.53□□□□□ -1.84
HRD1Q08109 TAF8YML114C 1533 nt3.53□□□□□ -1.84
HRD1Q08109 KRE5YOR336W 4098 nt3.53□□□□□ -1.84
HRD1Q08109 KRE29YER038C 1395 nt3.52□□□□□ -1.85
HRD1Q08109 FAS2YPL231W 5664 nt3.52□□□□□ -1.85
HRD1Q08109 NAM2YLR382C 2685 nt3.52□□□□□ -1.85
HRD1Q08109 KTR7YIL085C 1554 nt3.52□□□□□ -1.85
HRD1Q08109 DPH6YLR143W 2058 nt3.52□□□□□ -1.85
HRD1Q08109 ALR2YFL050C 2577 nt3.52□□□□□ -1.85
HRD1Q08109 snR7-LsnR7-L 214 nt3.52□□□□□ -1.85
HRD1Q08109 FMP46YKR049C 402 nt3.52□□□□□ -1.85
HRD1Q08109 TIF5YPR041W 1218 nt3.52□□□□□ -1.85
HRD1Q08109 YCF1YDR135C 4548 nt3.52□□□□□ -1.85
HRD1Q08109 SLM5YCR024C 1479 nt3.52□□□□□ -1.85
HRD1Q08109 TAF6YGL112C 1551 nt3.51□□□□□ -1.85
HRD1Q08109 MIS1YBR084W 2928 nt3.51□□□□□ -1.85
HRD1Q08109 SUL2YLR092W 2682 nt3.51□□□□□ -1.85
HRD1Q08109 SPI1YER150W 447 nt3.51□□□□□ -1.85
HRD1Q08109 SOL4YGR248W 768 nt3.51□□□□□ -1.85
HRD1Q08109 MAD2YJL030W 591 nt3.51□□□□□ -1.85
HRD1Q08109 SIW14YNL032W 846 nt3.51□□□□□ -1.85
HRD1Q08109 ABP140YOR239W 1887 nt3.51□□□□□ -1.85
HRD1Q08109 DHR2YKL078W 2208 nt3.51□□□□□ -1.85
HRD1Q08109 FMP25YLR077W 1752 nt3.51□□□□□ -1.85
HRD1Q08109 MMT1YMR177W 1533 nt3.5□□□□□ -1.85
HRD1Q08109 EMP47YFL048C 1338 nt3.5□□□□□ -1.85
HRD1Q08109 IBA57YJR122W 1494 nt3.5□□□□□ -1.85
HRD1Q08109 NUS1YDL193W 1128 nt3.5□□□□□ -1.85
HRD1Q08109 RDN5-1RDN5-1 121 nt3.5□□□□□ -1.85
HRD1Q08109 RDN5-6RDN5-6 121 nt3.5□□□□□ -1.85
HRD1Q08109 ECM15YBL001C 315 nt3.5□□□□□ -1.85
HRD1Q08109 YBR219CYBR219C 384 nt3.5□□□□□ -1.85
HRD1Q08109 FRM2YCL026C-A 582 nt3.5□□□□□ -1.85
HRD1Q08109 TRF5YNL299W 1929 nt3.5□□□□□ -1.85
HRD1Q08109 MYO3YKL129C 3819 nt3.5□□□□□ -1.85
HRD1Q08109 SRS2YJL092W 3525 nt3.49□□□□□ -1.85
HRD1Q08109 POL12YBL035C 2118 nt3.49□□□□□ -1.85
HRD1Q08109 OCA4YCR095C 1089 nt3.49□□□□□ -1.85
HRD1Q08109 FMP10YER182W 735 nt3.49□□□□□ -1.85
HRD1Q08109 RAD54YGL163C 2697 nt3.49□□□□□ -1.85
HRD1Q08109 PHM7YOL084W 2976 nt3.49□□□□□ -1.85
HRD1Q08109 YTM1YOR272W 1383 nt3.49□□□□□ -1.85
HRD1Q08109 CDC9YDL164C 2268 nt3.49□□□□□ -1.85
HRD1Q08109 MET17YLR303W 1335 nt3.48□□□□□ -1.85
HRD1Q08109 PTR3YFR029W 2037 nt3.48□□□□□ -1.85
HRD1Q08109 OMS1YDR316W 1416 nt3.48□□□□□ -1.85
HRD1Q08109 YGL132WYGL132W 336 nt3.48□□□□□ -1.85
HRD1Q08109 MRP4YHL004W 1185 nt3.48□□□□□ -1.85
HRD1Q08109 ECM34YHL043W 513 nt3.48□□□□□ -1.85
HRD1Q08109 GEP4YHR100C 558 nt3.48□□□□□ -1.85
HRD1Q08109 EFB1YAL003W 621 nt3.48□□□□□ -1.85
HRD1Q08109 RFC2YJR068W 1062 nt3.48□□□□□ -1.85
HRD1Q08109 CNB1YKL190W 528 nt3.48□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms