Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H1AQ02539 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HIST1H1AQ02539 YBX1P4-201ENST00000392794 808 ntBASIC16.97■□□□□ 0.31
HIST1H1AQ02539 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HIST1H1AQ02539 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H1AQ02539 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H1AQ02539 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H1AQ02539 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST1H1AQ02539 DUSP8P3-201ENST00000399571 1760 ntBASIC16.97■□□□□ 0.31
HIST1H1AQ02539 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST1H1AQ02539 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST1H1AQ02539 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H1AQ02539 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.96■□□□□ 0.31
HIST1H1AQ02539 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H1AQ02539 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H1AQ02539 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H1AQ02539 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H1AQ02539 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H1AQ02539 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H1AQ02539 C1orf229-201ENST00000623686 2258 ntBASIC16.96■□□□□ 0.31
HIST1H1AQ02539 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
HIST1H1AQ02539 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HIST1H1AQ02539 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HIST1H1AQ02539 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.96■□□□□ 0.3
HIST1H1AQ02539 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HIST1H1AQ02539 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 AF131216.4-201ENST00000638924 1588 ntBASIC16.95■□□□□ 0.3
HIST1H1AQ02539 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 MIR4508-201ENST00000584178 70 ntBASIC16.95■□□□□ 0.3
HIST1H1AQ02539 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 AC233723.2-201ENST00000623798 2106 ntBASIC16.95■□□□□ 0.3
HIST1H1AQ02539 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H1AQ02539 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H1AQ02539 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H1AQ02539 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H1AQ02539 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.94■□□□□ 0.3
HIST1H1AQ02539 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H1AQ02539 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.94■□□□□ 0.3
HIST1H1AQ02539 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H1AQ02539 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
HIST1H1AQ02539 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.94■□□□□ 0.3
HIST1H1AQ02539 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.94■□□□□ 0.3
HIST1H1AQ02539 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H1AQ02539 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H1AQ02539 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H1AQ02539 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H1AQ02539 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.93■□□□□ 0.3
HIST1H1AQ02539 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H1AQ02539 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H1AQ02539 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H1AQ02539 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H1AQ02539 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.92■□□□□ 0.3
HIST1H1AQ02539 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HIST1H1AQ02539 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H1AQ02539 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H1AQ02539 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H1AQ02539 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H1AQ02539 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H1AQ02539 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.92■□□□□ 0.3
HIST1H1AQ02539 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H1AQ02539 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HIST1H1AQ02539 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H1AQ02539 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms