Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HSPG2P98160 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HSPG2P98160 KRT19P1-201ENST00000405746 1186 ntBASIC14.1□□□□□ -0.15
HSPG2P98160 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HSPG2P98160 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HSPG2P98160 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HSPG2P98160 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HSPG2P98160 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HSPG2P98160 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
HSPG2P98160 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HSPG2P98160 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HSPG2P98160 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.1□□□□□ -0.15
HSPG2P98160 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.1□□□□□ -0.15
HSPG2P98160 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HSPG2P98160 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.1□□□□□ -0.15
HSPG2P98160 POU5F1P3-201ENST00000428824 1078 ntBASIC14.09□□□□□ -0.15
HSPG2P98160 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.09□□□□□ -0.15
HSPG2P98160 AC105233.4-201ENST00000642045 216 ntBASIC14.09□□□□□ -0.15
HSPG2P98160 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HSPG2P98160 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC14.09□□□□□ -0.15
HSPG2P98160 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HSPG2P98160 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HSPG2P98160 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HSPG2P98160 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HSPG2P98160 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HSPG2P98160 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HSPG2P98160 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HSPG2P98160 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HSPG2P98160 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HSPG2P98160 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HSPG2P98160 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.09□□□□□ -0.15
HSPG2P98160 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HSPG2P98160 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HSPG2P98160 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HSPG2P98160 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HSPG2P98160 AC005181.1-201ENST00000604782 1256 ntBASIC14.08□□□□□ -0.15
HSPG2P98160 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HSPG2P98160 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HSPG2P98160 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
HSPG2P98160 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HSPG2P98160 TSPY6P-201ENST00000448518 926 ntBASIC14.08□□□□□ -0.16
HSPG2P98160 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HSPG2P98160 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC14.08□□□□□ -0.16
HSPG2P98160 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HSPG2P98160 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.08□□□□□ -0.16
HSPG2P98160 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.08□□□□□ -0.16
HSPG2P98160 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HSPG2P98160 SLC7A5P1-201ENST00000568957 537 ntBASIC14.08□□□□□ -0.16
HSPG2P98160 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HSPG2P98160 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HSPG2P98160 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HSPG2P98160 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HSPG2P98160 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HSPG2P98160 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC14.07□□□□□ -0.16
HSPG2P98160 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HSPG2P98160 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HSPG2P98160 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HSPG2P98160 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HSPG2P98160 AC083906.2-201ENST00000511578 360 ntBASIC14.07□□□□□ -0.16
HSPG2P98160 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HSPG2P98160 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.07□□□□□ -0.16
HSPG2P98160 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HSPG2P98160 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HSPG2P98160 DUSP5P2-201ENST00000426873 1033 ntBASIC14.07□□□□□ -0.16
HSPG2P98160 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HSPG2P98160 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HSPG2P98160 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.07□□□□□ -0.16
HSPG2P98160 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HSPG2P98160 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HSPG2P98160 AL121832.2-201ENST00000610979 668 ntBASIC14.06□□□□□ -0.16
HSPG2P98160 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HSPG2P98160 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.06□□□□□ -0.16
HSPG2P98160 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HSPG2P98160 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC14.06□□□□□ -0.16
HSPG2P98160 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HSPG2P98160 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HSPG2P98160 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC14.06□□□□□ -0.16
HSPG2P98160 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HSPG2P98160 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
HSPG2P98160 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.06□□□□□ -0.16
HSPG2P98160 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HSPG2P98160 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HSPG2P98160 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HSPG2P98160 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.05□□□□□ -0.16
HSPG2P98160 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HSPG2P98160 CNN2P6-201ENST00000439038 900 ntBASIC14.05□□□□□ -0.16
HSPG2P98160 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.05□□□□□ -0.16
HSPG2P98160 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.05□□□□□ -0.16
HSPG2P98160 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HSPG2P98160 KRT18P29-201ENST00000397031 1267 ntBASIC14.05□□□□□ -0.16
HSPG2P98160 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.05□□□□□ -0.16
HSPG2P98160 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
HSPG2P98160 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HSPG2P98160 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HSPG2P98160 AL022069.1-201ENST00000568025 1636 ntBASIC14.04□□□□□ -0.16
HSPG2P98160 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HSPG2P98160 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HSPG2P98160 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HSPG2P98160 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.04□□□□□ -0.16
HSPG2P98160 DUX4L4-201ENST00000566884 1269 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms