Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.82■■□□□ 1.08
YBX1P67809 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.82■■□□□ 1.08
YBX1P67809 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
YBX1P67809 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
YBX1P67809 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
YBX1P67809 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
YBX1P67809 ANOS2P-203ENST00000472227 1816 ntBASIC21.81■■□□□ 1.08
YBX1P67809 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.81■■□□□ 1.08
YBX1P67809 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
YBX1P67809 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
YBX1P67809 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.81■■□□□ 1.08
YBX1P67809 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.81■■□□□ 1.08
YBX1P67809 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.81■■□□□ 1.08
YBX1P67809 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.81■■□□□ 1.08
YBX1P67809 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
YBX1P67809 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
YBX1P67809 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
YBX1P67809 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
YBX1P67809 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
YBX1P67809 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
YBX1P67809 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
YBX1P67809 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
YBX1P67809 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
YBX1P67809 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
YBX1P67809 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.8■■□□□ 1.08
YBX1P67809 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
YBX1P67809 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
YBX1P67809 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.8■■□□□ 1.08
YBX1P67809 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.8■■□□□ 1.08
YBX1P67809 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
YBX1P67809 AL117328.2-201ENST00000624617 1940 ntBASIC21.8■■□□□ 1.08
YBX1P67809 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.8■■□□□ 1.08
YBX1P67809 C1orf229-201ENST00000623686 2258 ntBASIC21.8■■□□□ 1.08
YBX1P67809 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
YBX1P67809 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.79■■□□□ 1.08
YBX1P67809 AL356740.2-201ENST00000601559 647 ntBASIC21.79■■□□□ 1.08
YBX1P67809 AL512631.2-201ENST00000604634 923 ntBASIC21.79■■□□□ 1.08
YBX1P67809 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
YBX1P67809 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
YBX1P67809 AC009102.2-201ENST00000606772 1639 ntBASIC21.79■■□□□ 1.08
YBX1P67809 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
YBX1P67809 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
YBX1P67809 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
YBX1P67809 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
YBX1P67809 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.78■■□□□ 1.08
YBX1P67809 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
YBX1P67809 AC131281.2-201ENST00000520478 145 ntBASIC21.78■■□□□ 1.08
YBX1P67809 MIR4466-201ENST00000606121 54 ntBASIC21.78■■□□□ 1.08
YBX1P67809 AC233723.2-201ENST00000623798 2106 ntBASIC21.78■■□□□ 1.08
YBX1P67809 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.78■■□□□ 1.08
YBX1P67809 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
YBX1P67809 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
YBX1P67809 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.77■■□□□ 1.08
YBX1P67809 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
YBX1P67809 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
YBX1P67809 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.77■■□□□ 1.08
YBX1P67809 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.77■■□□□ 1.08
YBX1P67809 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.77■■□□□ 1.08
YBX1P67809 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.77■■□□□ 1.08
YBX1P67809 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
YBX1P67809 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
YBX1P67809 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.07
YBX1P67809 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.77■■□□□ 1.07
YBX1P67809 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
YBX1P67809 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.76■■□□□ 1.07
YBX1P67809 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.76■■□□□ 1.07
YBX1P67809 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
YBX1P67809 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
YBX1P67809 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.76■■□□□ 1.07
YBX1P67809 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
YBX1P67809 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
YBX1P67809 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
YBX1P67809 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
YBX1P67809 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.75■■□□□ 1.07
YBX1P67809 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
YBX1P67809 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
YBX1P67809 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
YBX1P67809 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
YBX1P67809 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
YBX1P67809 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
YBX1P67809 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
YBX1P67809 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
YBX1P67809 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.74■■□□□ 1.07
YBX1P67809 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.74■■□□□ 1.07
YBX1P67809 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
YBX1P67809 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
YBX1P67809 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
YBX1P67809 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.74■■□□□ 1.07
YBX1P67809 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
YBX1P67809 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
YBX1P67809 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
YBX1P67809 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
YBX1P67809 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
YBX1P67809 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
YBX1P67809 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
YBX1P67809 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
YBX1P67809 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
YBX1P67809 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
YBX1P67809 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
YBX1P67809 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms