Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB5CP51148 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB5CP51148 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB5CP51148 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB5CP51148 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5CP51148 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB5CP51148 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5CP51148 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5CP51148 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB5CP51148 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB5CP51148 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5CP51148 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5CP51148 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RAB5CP51148 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5CP51148 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB5CP51148 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5CP51148 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
RAB5CP51148 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB5CP51148 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RAB5CP51148 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RAB5CP51148 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5CP51148 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB5CP51148 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB5CP51148 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5CP51148 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5CP51148 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5CP51148 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5CP51148 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5CP51148 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RAB5CP51148 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.91■□□□□ 0.46
RAB5CP51148 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RAB5CP51148 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5CP51148 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.91■□□□□ 0.46
RAB5CP51148 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RAB5CP51148 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB5CP51148 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB5CP51148 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
RAB5CP51148 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB5CP51148 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB5CP51148 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB5CP51148 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.9■□□□□ 0.46
RAB5CP51148 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RAB5CP51148 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB5CP51148 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB5CP51148 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB5CP51148 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RAB5CP51148 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB5CP51148 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB5CP51148 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB5CP51148 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RAB5CP51148 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB5CP51148 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB5CP51148 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAB5CP51148 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
RAB5CP51148 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RAB5CP51148 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB5CP51148 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB5CP51148 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB5CP51148 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB5CP51148 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB5CP51148 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB5CP51148 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB5CP51148 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB5CP51148 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB5CP51148 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RAB5CP51148 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5CP51148 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5CP51148 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB5CP51148 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5CP51148 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5CP51148 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5CP51148 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.88■□□□□ 0.45
RAB5CP51148 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5CP51148 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB5CP51148 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5CP51148 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5CP51148 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB5CP51148 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
RAB5CP51148 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB5CP51148 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB5CP51148 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RAB5CP51148 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB5CP51148 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.87■□□□□ 0.45
RAB5CP51148 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB5CP51148 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.87■□□□□ 0.45
RAB5CP51148 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RAB5CP51148 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB5CP51148 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB5CP51148 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RAB5CP51148 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB5CP51148 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAB5CP51148 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB5CP51148 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB5CP51148 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAB5CP51148 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB5CP51148 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.86■□□□□ 0.45
RAB5CP51148 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RAB5CP51148 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAB5CP51148 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAB5CP51148 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms