Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CENPAP49450 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.09■□□□□ 0.81
CENPAP49450 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CENPAP49450 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CENPAP49450 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CENPAP49450 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CENPAP49450 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CENPAP49450 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CENPAP49450 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CENPAP49450 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
CENPAP49450 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.08■□□□□ 0.81
CENPAP49450 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CENPAP49450 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.08■□□□□ 0.81
CENPAP49450 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CENPAP49450 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CENPAP49450 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CENPAP49450 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CENPAP49450 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CENPAP49450 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CENPAP49450 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CENPAP49450 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CENPAP49450 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CENPAP49450 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.07■□□□□ 0.8
CENPAP49450 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CENPAP49450 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CENPAP49450 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.07■□□□□ 0.8
CENPAP49450 AL031848.2-201ENST00000607670 837 ntBASIC20.07■□□□□ 0.8
CENPAP49450 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
CENPAP49450 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.07■□□□□ 0.8
CENPAP49450 AC079834.2-201ENST00000609776 1949 ntBASIC20.07■□□□□ 0.8
CENPAP49450 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CENPAP49450 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CENPAP49450 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CENPAP49450 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CENPAP49450 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CENPAP49450 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.06■□□□□ 0.8
CENPAP49450 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CENPAP49450 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CENPAP49450 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CENPAP49450 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CENPAP49450 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CENPAP49450 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CENPAP49450 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.06■□□□□ 0.8
CENPAP49450 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CENPAP49450 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CENPAP49450 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.05■□□□□ 0.8
CENPAP49450 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CENPAP49450 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CENPAP49450 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CENPAP49450 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.05■□□□□ 0.8
CENPAP49450 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.05■□□□□ 0.8
CENPAP49450 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.05■□□□□ 0.8
CENPAP49450 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CENPAP49450 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CENPAP49450 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CENPAP49450 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.04■□□□□ 0.8
CENPAP49450 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CENPAP49450 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.04■□□□□ 0.8
CENPAP49450 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CENPAP49450 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CENPAP49450 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CENPAP49450 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.04■□□□□ 0.8
CENPAP49450 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CENPAP49450 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CENPAP49450 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CENPAP49450 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CENPAP49450 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CENPAP49450 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CENPAP49450 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CENPAP49450 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CENPAP49450 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CENPAP49450 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.03■□□□□ 0.8
CENPAP49450 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CENPAP49450 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.03■□□□□ 0.8
CENPAP49450 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CENPAP49450 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CENPAP49450 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CENPAP49450 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CENPAP49450 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CENPAP49450 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.02■□□□□ 0.8
CENPAP49450 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CENPAP49450 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.02■□□□□ 0.8
CENPAP49450 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.02■□□□□ 0.8
CENPAP49450 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.02■□□□□ 0.8
CENPAP49450 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CENPAP49450 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.02■□□□□ 0.79
CENPAP49450 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CENPAP49450 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.02■□□□□ 0.79
CENPAP49450 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPAP49450 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPAP49450 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CENPAP49450 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.01■□□□□ 0.79
CENPAP49450 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.01■□□□□ 0.79
CENPAP49450 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPAP49450 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.01■□□□□ 0.79
CENPAP49450 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CENPAP49450 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPAP49450 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CENPAP49450 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CENPAP49450 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms