Protein–RNA interactions for Protein: P47992

XCL1, Lymphotactin, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1P47992 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XCL1P47992 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.27■□□□□ 0.03
XCL1P47992 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
XCL1P47992 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XCL1P47992 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XCL1P47992 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XCL1P47992 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.27■□□□□ 0.03
XCL1P47992 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XCL1P47992 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.26■□□□□ 0.03
XCL1P47992 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
XCL1P47992 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC15.26■□□□□ 0.03
XCL1P47992 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
XCL1P47992 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XCL1P47992 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.26■□□□□ 0.03
XCL1P47992 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
XCL1P47992 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XCL1P47992 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XCL1P47992 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
XCL1P47992 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
XCL1P47992 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
XCL1P47992 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
XCL1P47992 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
XCL1P47992 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
XCL1P47992 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
XCL1P47992 KRT18P24-201ENST00000344739 1156 ntBASIC15.25■□□□□ 0.03
XCL1P47992 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
XCL1P47992 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC15.25■□□□□ 0.03
XCL1P47992 PVT1_1.1-201ENST00000615125 194 ntBASIC15.25■□□□□ 0.03
XCL1P47992 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
XCL1P47992 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.25■□□□□ 0.03
XCL1P47992 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.25■□□□□ 0.03
XCL1P47992 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
XCL1P47992 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
XCL1P47992 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
XCL1P47992 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
XCL1P47992 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
XCL1P47992 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
XCL1P47992 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
XCL1P47992 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
XCL1P47992 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
XCL1P47992 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
XCL1P47992 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
XCL1P47992 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
XCL1P47992 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC15.24■□□□□ 0.03
XCL1P47992 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.24■□□□□ 0.03
XCL1P47992 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
XCL1P47992 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.24■□□□□ 0.03
XCL1P47992 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.24■□□□□ 0.03
XCL1P47992 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
XCL1P47992 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
XCL1P47992 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
XCL1P47992 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
XCL1P47992 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
XCL1P47992 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.24■□□□□ 0.03
XCL1P47992 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
XCL1P47992 AF131216.4-201ENST00000638924 1588 ntBASIC15.24■□□□□ 0.03
XCL1P47992 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
XCL1P47992 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.24■□□□□ 0.03
XCL1P47992 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
XCL1P47992 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.23■□□□□ 0.03
XCL1P47992 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.23■□□□□ 0.03
XCL1P47992 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.23■□□□□ 0.03
XCL1P47992 GUK1-208ENST00000366728 842 ntTSL 2 BASIC15.23■□□□□ 0.03
XCL1P47992 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
XCL1P47992 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
XCL1P47992 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
XCL1P47992 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
XCL1P47992 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
XCL1P47992 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
XCL1P47992 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
XCL1P47992 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
XCL1P47992 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
XCL1P47992 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
XCL1P47992 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
XCL1P47992 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
XCL1P47992 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
XCL1P47992 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
XCL1P47992 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
XCL1P47992 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
XCL1P47992 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.22■□□□□ 0.03
XCL1P47992 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
XCL1P47992 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.22■□□□□ 0.03
XCL1P47992 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC15.22■□□□□ 0.03
XCL1P47992 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
XCL1P47992 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.22■□□□□ 0.03
XCL1P47992 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
XCL1P47992 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
XCL1P47992 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
XCL1P47992 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
XCL1P47992 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
XCL1P47992 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XCL1P47992 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
XCL1P47992 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XCL1P47992 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.21■□□□□ 0.03
XCL1P47992 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.21■□□□□ 0.03
XCL1P47992 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.21■□□□□ 0.03
XCL1P47992 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
XCL1P47992 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
XCL1P47992 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
XCL1P47992 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms