Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 SCP1YOR367W 603 nt4.9□□□□□ -1.63
RTR1P40084 SMA1YPL027W 738 nt4.9□□□□□ -1.63
RTR1P40084 IDS2YJL146W 1410 nt4.89□□□□□ -1.63
RTR1P40084 STE12YHR084W 2067 nt4.89□□□□□ -1.63
RTR1P40084 TAF11YML015C 1041 nt4.89□□□□□ -1.63
RTR1P40084 HAL1YPR005C 885 nt4.89□□□□□ -1.63
RTR1P40084 CPR1YDR155C 489 nt4.88□□□□□ -1.63
RTR1P40084 YGR139WYGR139W 339 nt4.88□□□□□ -1.63
RTR1P40084 BLM10YFL007W 6432 nt4.88□□□□□ -1.63
RTR1P40084 FZO1YBR179C 2568 nt4.88□□□□□ -1.63
RTR1P40084 YPK9YOR291W 4419 nt4.88□□□□□ -1.63
RTR1P40084 MIS1YBR084W 2928 nt4.87□□□□□ -1.63
RTR1P40084 FPK1YNR047W 2682 nt4.87□□□□□ -1.63
RTR1P40084 UPS3YDR185C 540 nt4.87□□□□□ -1.63
RTR1P40084 SPS18YNL204C 903 nt4.87□□□□□ -1.63
RTR1P40084 YPL162CYPL162C 822 nt4.87□□□□□ -1.63
RTR1P40084 STP22YCL008C 1158 nt4.87□□□□□ -1.63
RTR1P40084 AIP1YMR092C 1848 nt4.87□□□□□ -1.63
RTR1P40084 NRK1YNL129W 723 nt4.86□□□□□ -1.63
RTR1P40084 SSL1YLR005W 1386 nt4.86□□□□□ -1.63
RTR1P40084 SSU1YPL092W 1377 nt4.86□□□□□ -1.63
RTR1P40084 YCF1YDR135C 4548 nt4.86□□□□□ -1.63
RTR1P40084 RFT1YBL020W 1725 nt4.86□□□□□ -1.63
RTR1P40084 PTR2YKR093W 1806 nt4.86□□□□□ -1.63
RTR1P40084 MSC7YHR039C 1935 nt4.85□□□□□ -1.63
RTR1P40084 ATG26YLR189C 3597 nt4.85□□□□□ -1.63
RTR1P40084 YER084WYER084W 387 nt4.85□□□□□ -1.63
RTR1P40084 YHR145CYHR145C 357 nt4.85□□□□□ -1.63
RTR1P40084 YJL211CYJL211C 444 nt4.85□□□□□ -1.63
RTR1P40084 RMI1YPL024W 726 nt4.85□□□□□ -1.63
RTR1P40084 YPL113CYPL113C 1191 nt4.85□□□□□ -1.63
RTR1P40084 MTC4YBR255W 2085 nt4.85□□□□□ -1.63
RTR1P40084 LCB2YDR062W 1686 nt4.84□□□□□ -1.63
RTR1P40084 TOS3YGL179C 1683 nt4.84□□□□□ -1.63
RTR1P40084 RSF1YMR030W 1131 nt4.84□□□□□ -1.63
RTR1P40084 ASI2YNL159C 870 nt4.84□□□□□ -1.63
RTR1P40084 CWC25YNL245C 540 nt4.84□□□□□ -1.63
RTR1P40084 GRE1YPL223C 507 nt4.84□□□□□ -1.63
RTR1P40084 UBP7YIL156W 3216 nt4.84□□□□□ -1.64
RTR1P40084 ZRC1YMR243C 1329 nt4.83□□□□□ -1.64
RTR1P40084 YDR261C-DYDR261C-D 4815 nt4.83□□□□□ -1.64
RTR1P40084 FDC1YDR539W 1512 nt4.82□□□□□ -1.64
RTR1P40084 YHL034W-AYHL034W-A 462 nt4.82□□□□□ -1.64
RTR1P40084 BNA1YJR025C 534 nt4.82□□□□□ -1.64
RTR1P40084 ELF1YKL160W 438 nt4.82□□□□□ -1.64
RTR1P40084 MCM1YMR043W 861 nt4.82□□□□□ -1.64
RTR1P40084 THI20YOL055C 1656 nt4.82□□□□□ -1.64
RTR1P40084 MTR10YOR160W 2919 nt4.82□□□□□ -1.64
RTR1P40084 PFK1YGR240C 2964 nt4.81□□□□□ -1.64
RTR1P40084 YCR085WYCR085W 354 nt4.81□□□□□ -1.64
RTR1P40084 RCR2YDR003W 633 nt4.81□□□□□ -1.64
RTR1P40084 GAL4YPL248C 2646 nt4.81□□□□□ -1.64
RTR1P40084 SIR2YDL042C 1689 nt4.8□□□□□ -1.64
RTR1P40084 STR2YJR130C 1920 nt4.8□□□□□ -1.64
RTR1P40084 IES6YEL044W 501 nt4.8□□□□□ -1.64
RTR1P40084 ECT1YGR007W 972 nt4.8□□□□□ -1.64
RTR1P40084 FAA3YIL009W 2085 nt4.8□□□□□ -1.64
RTR1P40084 NOG1YPL093W 1944 nt4.8□□□□□ -1.64
RTR1P40084 FRE7YOL152W 1863 nt4.79□□□□□ -1.64
RTR1P40084 RPB2YOR151C 3675 nt4.79□□□□□ -1.64
RTR1P40084 CNL1YDR357C 369 nt4.79□□□□□ -1.64
RTR1P40084 GMH1YKR030W 822 nt4.79□□□□□ -1.64
RTR1P40084 KTR2YKR061W 1278 nt4.79□□□□□ -1.64
RTR1P40084 ATG17YLR423C 1254 nt4.79□□□□□ -1.64
RTR1P40084 BSC5YNR069C 1470 nt4.79□□□□□ -1.64
RTR1P40084 MCM7YBR202W 2538 nt4.79□□□□□ -1.64
RTR1P40084 FRE1YLR214W 2061 nt4.79□□□□□ -1.64
RTR1P40084 PCA1YBR295W 3651 nt4.78□□□□□ -1.64
RTR1P40084 HOT1YMR172W 2160 nt4.78□□□□□ -1.64
RTR1P40084 ALG2YGL065C 1512 nt4.78□□□□□ -1.64
RTR1P40084 NHX1YDR456W 1902 nt4.78□□□□□ -1.64
RTR1P40084 GRC3YLL035W 1899 nt4.78□□□□□ -1.64
RTR1P40084 HSP42YDR171W 1128 nt4.78□□□□□ -1.64
RTR1P40084 DPH1YIL103W 1278 nt4.78□□□□□ -1.64
RTR1P40084 COQ5YML110C 924 nt4.78□□□□□ -1.64
RTR1P40084 TGS1YPL157W 948 nt4.78□□□□□ -1.64
RTR1P40084 YPL260WYPL260W 1656 nt4.77□□□□□ -1.65
RTR1P40084 FAT1YBR041W 2010 nt4.77□□□□□ -1.65
RTR1P40084 STP4YDL048C 1473 nt4.77□□□□□ -1.65
RTR1P40084 CBP1YJL209W 1965 nt4.77□□□□□ -1.65
RTR1P40084 ERG5YMR015C 1617 nt4.77□□□□□ -1.65
RTR1P40084 YER034WYER034W 558 nt4.77□□□□□ -1.65
RTR1P40084 YHL049CYHL049C 816 nt4.77□□□□□ -1.65
RTR1P40084 NOC2YOR206W 2133 nt4.77□□□□□ -1.65
RTR1P40084 ECM32YER176W 3366 nt4.77□□□□□ -1.65
RTR1P40084 LEU1YGL009C 2340 nt4.77□□□□□ -1.65
RTR1P40084 ATG2YNL242W 4779 nt4.76□□□□□ -1.65
RTR1P40084 YEL074WYEL074W 339 nt4.76□□□□□ -1.65
RTR1P40084 RPS0AYGR214W 759 nt4.76□□□□□ -1.65
RTR1P40084 YLR154W-BYLR154W-B 165 nt4.76□□□□□ -1.65
RTR1P40084 URA4YLR420W 1095 nt4.76□□□□□ -1.65
RTR1P40084 YNL228WYNL228W 777 nt4.76□□□□□ -1.65
RTR1P40084 YOL153CYOL153C 1746 nt4.76□□□□□ -1.65
RTR1P40084 YOR008W-BYOR008W-B 102 nt4.76□□□□□ -1.65
RTR1P40084 GAL11YOL051W 3246 nt4.76□□□□□ -1.65
RTR1P40084 PMT5YDL093W 2232 nt4.75□□□□□ -1.65
RTR1P40084 MTM1YGR257C 1101 nt4.75□□□□□ -1.65
RTR1P40084 REC104YHR157W 549 nt4.75□□□□□ -1.65
RTR1P40084 REC114YMR133W 1287 nt4.75□□□□□ -1.65
RTR1P40084 MPH2YDL247W 1830 nt4.74□□□□□ -1.65
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms