Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.02■□□□□ 0.64
CDKN1AP38936 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDKN1AP38936 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDKN1AP38936 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDKN1AP38936 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CDKN1AP38936 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDKN1AP38936 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.02■□□□□ 0.63
CDKN1AP38936 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CDKN1AP38936 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CDKN1AP38936 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.01■□□□□ 0.63
CDKN1AP38936 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CDKN1AP38936 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKN1AP38936 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKN1AP38936 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKN1AP38936 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKN1AP38936 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDKN1AP38936 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKN1AP38936 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.01■□□□□ 0.63
CDKN1AP38936 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.01■□□□□ 0.63
CDKN1AP38936 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKN1AP38936 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKN1AP38936 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKN1AP38936 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKN1AP38936 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKN1AP38936 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CDKN1AP38936 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19■□□□□ 0.63
CDKN1AP38936 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CDKN1AP38936 YBX1P1-201ENST00000445822 960 ntBASIC19■□□□□ 0.63
CDKN1AP38936 IGHV3-19-201ENST00000521488 291 ntBASIC19■□□□□ 0.63
CDKN1AP38936 MIR6084-201ENST00000622012 110 ntBASIC19■□□□□ 0.63
CDKN1AP38936 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKN1AP38936 AC138932.3-201ENST00000567634 1902 ntBASIC19■□□□□ 0.63
CDKN1AP38936 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKN1AP38936 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19■□□□□ 0.63
CDKN1AP38936 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDKN1AP38936 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKN1AP38936 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.99■□□□□ 0.63
CDKN1AP38936 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.99■□□□□ 0.63
CDKN1AP38936 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.99■□□□□ 0.63
CDKN1AP38936 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDKN1AP38936 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKN1AP38936 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKN1AP38936 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CDKN1AP38936 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKN1AP38936 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDKN1AP38936 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKN1AP38936 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKN1AP38936 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKN1AP38936 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKN1AP38936 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKN1AP38936 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDKN1AP38936 AC010525.1-201ENST00000585559 441 ntBASIC18.98■□□□□ 0.63
CDKN1AP38936 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDKN1AP38936 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.98■□□□□ 0.63
CDKN1AP38936 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKN1AP38936 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKN1AP38936 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKN1AP38936 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDKN1AP38936 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.98■□□□□ 0.63
CDKN1AP38936 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKN1AP38936 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKN1AP38936 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKN1AP38936 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CDKN1AP38936 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKN1AP38936 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKN1AP38936 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.97■□□□□ 0.63
CDKN1AP38936 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKN1AP38936 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKN1AP38936 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.97■□□□□ 0.63
CDKN1AP38936 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKN1AP38936 IKBKGP1-201ENST00000612193 1073 ntBASIC18.97■□□□□ 0.63
CDKN1AP38936 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKN1AP38936 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKN1AP38936 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKN1AP38936 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKN1AP38936 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CDKN1AP38936 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKN1AP38936 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKN1AP38936 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKN1AP38936 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKN1AP38936 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKN1AP38936 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN1AP38936 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKN1AP38936 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKN1AP38936 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN1AP38936 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN1AP38936 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN1AP38936 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN1AP38936 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CDKN1AP38936 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN1AP38936 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CDKN1AP38936 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKN1AP38936 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKN1AP38936 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.96■□□□□ 0.63
CDKN1AP38936 AL358852.1-201ENST00000623174 1268 ntBASIC18.96■□□□□ 0.63
CDKN1AP38936 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.96■□□□□ 0.63
CDKN1AP38936 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.96■□□□□ 0.63
CDKN1AP38936 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.95■□□□□ 0.62
CDKN1AP38936 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKN1AP38936 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms