Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC27.87■■■□□ 2.05
PDE6BP35913 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC27.87■■■□□ 2.05
PDE6BP35913 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
PDE6BP35913 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PDE6BP35913 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
PDE6BP35913 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
PDE6BP35913 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PDE6BP35913 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC27.86■■■□□ 2.05
PDE6BP35913 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
PDE6BP35913 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC27.86■■■□□ 2.05
PDE6BP35913 RAP2CP1-201ENST00000605103 478 ntBASIC27.86■■■□□ 2.05
PDE6BP35913 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.86■■■□□ 2.05
PDE6BP35913 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PDE6BP35913 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
PDE6BP35913 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PDE6BP35913 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC27.86■■■□□ 2.05
PDE6BP35913 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
PDE6BP35913 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.85■■■□□ 2.05
PDE6BP35913 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PDE6BP35913 AC016769.1-201ENST00000409132 1010 ntBASIC27.85■■■□□ 2.05
PDE6BP35913 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
PDE6BP35913 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC27.85■■■□□ 2.05
PDE6BP35913 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PDE6BP35913 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PDE6BP35913 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PDE6BP35913 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PDE6BP35913 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
PDE6BP35913 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDE6BP35913 AC137761.2-201ENST00000561729 223 ntBASIC27.84■■■□□ 2.05
PDE6BP35913 AC145350.3-201ENST00000569033 163 ntBASIC27.84■■■□□ 2.05
PDE6BP35913 KRT18P61-201ENST00000585825 1298 ntBASIC27.84■■■□□ 2.05
PDE6BP35913 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDE6BP35913 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDE6BP35913 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDE6BP35913 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC27.84■■■□□ 2.05
PDE6BP35913 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDE6BP35913 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.83■■■□□ 2.05
PDE6BP35913 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.05
PDE6BP35913 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PDE6BP35913 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC27.83■■■□□ 2.05
PDE6BP35913 MFF-208ENST00000409616 1247 ntTSL 5 BASIC27.83■■■□□ 2.05
PDE6BP35913 CDCA4P2-201ENST00000441182 718 ntBASIC27.83■■■□□ 2.05
PDE6BP35913 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC27.83■■■□□ 2.05
PDE6BP35913 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
PDE6BP35913 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC27.83■■■□□ 2.05
PDE6BP35913 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.83■■■□□ 2.05
PDE6BP35913 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.83■■■□□ 2.05
PDE6BP35913 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PDE6BP35913 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.83■■■□□ 2.05
PDE6BP35913 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PDE6BP35913 GAS2L1P2-201ENST00000436355 1356 ntBASIC27.83■■■□□ 2.05
PDE6BP35913 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.82■■■□□ 2.04
PDE6BP35913 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.82■■■□□ 2.04
PDE6BP35913 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
PDE6BP35913 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
PDE6BP35913 GALNS-213ENST00000569433 723 ntTSL 3 BASIC27.82■■■□□ 2.04
PDE6BP35913 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.82■■■□□ 2.04
PDE6BP35913 AC073111.5-205ENST00000641717 521 ntBASIC27.82■■■□□ 2.04
PDE6BP35913 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PDE6BP35913 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PDE6BP35913 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PDE6BP35913 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC27.81■■■□□ 2.04
PDE6BP35913 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC27.81■■■□□ 2.04
PDE6BP35913 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC27.81■■■□□ 2.04
PDE6BP35913 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC27.81■■■□□ 2.04
PDE6BP35913 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
PDE6BP35913 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
PDE6BP35913 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
PDE6BP35913 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PDE6BP35913 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC27.81■■■□□ 2.04
PDE6BP35913 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PDE6BP35913 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PDE6BP35913 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PDE6BP35913 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC27.8■■■□□ 2.04
PDE6BP35913 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC27.8■■■□□ 2.04
PDE6BP35913 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PDE6BP35913 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PDE6BP35913 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.8■■■□□ 2.04
PDE6BP35913 AC145676.1-201ENST00000514988 2004 ntBASIC27.8■■■□□ 2.04
PDE6BP35913 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PDE6BP35913 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
PDE6BP35913 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.79■■■□□ 2.04
PDE6BP35913 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.79■■■□□ 2.04
PDE6BP35913 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC27.79■■■□□ 2.04
PDE6BP35913 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
PDE6BP35913 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PDE6BP35913 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.78■■■□□ 2.04
PDE6BP35913 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
PDE6BP35913 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC27.78■■■□□ 2.04
PDE6BP35913 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PDE6BP35913 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC27.78■■■□□ 2.04
PDE6BP35913 HSCB-202ENST00000398941 955 ntTSL 2 BASIC27.78■■■□□ 2.04
PDE6BP35913 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PDE6BP35913 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.78■■■□□ 2.04
PDE6BP35913 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
PDE6BP35913 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PDE6BP35913 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PDE6BP35913 STX4-202ENST00000394998 1498 ntTSL 2 BASIC27.77■■■□□ 2.04
PDE6BP35913 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
PDE6BP35913 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms