Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFC2P35250 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.46■■□□□ 1.51
RFC2P35250 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.46■■□□□ 1.51
RFC2P35250 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RFC2P35250 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.45■■□□□ 1.51
RFC2P35250 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.45■■□□□ 1.5
RFC2P35250 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RFC2P35250 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.45■■□□□ 1.5
RFC2P35250 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.45■■□□□ 1.5
RFC2P35250 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
RFC2P35250 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
RFC2P35250 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.45■■□□□ 1.5
RFC2P35250 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.45■■□□□ 1.5
RFC2P35250 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RFC2P35250 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RFC2P35250 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.45■■□□□ 1.5
RFC2P35250 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
RFC2P35250 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.44■■□□□ 1.5
RFC2P35250 AC006015.1-201ENST00000429970 570 ntBASIC24.44■■□□□ 1.5
RFC2P35250 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.44■■□□□ 1.5
RFC2P35250 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.44■■□□□ 1.5
RFC2P35250 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.44■■□□□ 1.5
RFC2P35250 AC080038.1-201ENST00000611274 1154 ntBASIC24.44■■□□□ 1.5
RFC2P35250 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RFC2P35250 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
RFC2P35250 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.44■■□□□ 1.5
RFC2P35250 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RFC2P35250 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
RFC2P35250 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
RFC2P35250 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RFC2P35250 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
RFC2P35250 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
RFC2P35250 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.43■■□□□ 1.5
RFC2P35250 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
RFC2P35250 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.43■■□□□ 1.5
RFC2P35250 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RFC2P35250 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
RFC2P35250 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RFC2P35250 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RFC2P35250 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RFC2P35250 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RFC2P35250 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.42■■□□□ 1.5
RFC2P35250 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.42■■□□□ 1.5
RFC2P35250 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.42■■□□□ 1.5
RFC2P35250 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.42■■□□□ 1.5
RFC2P35250 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.42■■□□□ 1.5
RFC2P35250 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RFC2P35250 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.42■■□□□ 1.5
RFC2P35250 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RFC2P35250 AC145676.1-201ENST00000514988 2004 ntBASIC24.42■■□□□ 1.5
RFC2P35250 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.42■■□□□ 1.5
RFC2P35250 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RFC2P35250 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RFC2P35250 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.41■■□□□ 1.5
RFC2P35250 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RFC2P35250 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.41■■□□□ 1.5
RFC2P35250 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.41■■□□□ 1.5
RFC2P35250 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.41■■□□□ 1.5
RFC2P35250 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RFC2P35250 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RFC2P35250 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RFC2P35250 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.41■■□□□ 1.5
RFC2P35250 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RFC2P35250 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.4■■□□□ 1.5
RFC2P35250 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RFC2P35250 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.4■■□□□ 1.5
RFC2P35250 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
RFC2P35250 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.4■■□□□ 1.5
RFC2P35250 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RFC2P35250 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.4■■□□□ 1.5
RFC2P35250 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RFC2P35250 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.39■■□□□ 1.5
RFC2P35250 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RFC2P35250 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RFC2P35250 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RFC2P35250 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RFC2P35250 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RFC2P35250 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
RFC2P35250 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RFC2P35250 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RFC2P35250 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
RFC2P35250 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RFC2P35250 AC016769.1-201ENST00000409132 1010 ntBASIC24.38■■□□□ 1.49
RFC2P35250 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RFC2P35250 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.38■■□□□ 1.49
RFC2P35250 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.38■■□□□ 1.49
RFC2P35250 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RFC2P35250 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
RFC2P35250 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RFC2P35250 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
RFC2P35250 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.37■■□□□ 1.49
RFC2P35250 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.37■■□□□ 1.49
RFC2P35250 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RFC2P35250 AC137761.2-201ENST00000561729 223 ntBASIC24.37■■□□□ 1.49
RFC2P35250 AC145350.3-201ENST00000569033 163 ntBASIC24.37■■□□□ 1.49
RFC2P35250 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.37■■□□□ 1.49
RFC2P35250 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
RFC2P35250 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RFC2P35250 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RFC2P35250 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms