Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC004812.2-201ENST00000611079 2094 ntBASIC19.72■□□□□ 0.75
HOXC12P31275 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC12P31275 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC12P31275 C17orf82-201ENST00000623772 1530 ntBASIC19.72■□□□□ 0.75
HOXC12P31275 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC12P31275 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC12P31275 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC12P31275 MIR939-201ENST00000401314 82 ntBASIC19.72■□□□□ 0.75
HOXC12P31275 AF213884.3-201ENST00000563833 479 ntBASIC19.72■□□□□ 0.75
HOXC12P31275 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HOXC12P31275 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.72■□□□□ 0.75
HOXC12P31275 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXC12P31275 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
HOXC12P31275 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC12P31275 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC12P31275 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC12P31275 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXC12P31275 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXC12P31275 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXC12P31275 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.71■□□□□ 0.75
HOXC12P31275 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC12P31275 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXC12P31275 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXC12P31275 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXC12P31275 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC12P31275 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXC12P31275 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HOXC12P31275 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC12P31275 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HOXC12P31275 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC12P31275 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC12P31275 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HOXC12P31275 ABCB10P4-201ENST00000566803 2184 ntBASIC19.7■□□□□ 0.74
HOXC12P31275 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXC12P31275 SYT6-210ENST00000641643 1587 ntBASIC19.7■□□□□ 0.74
HOXC12P31275 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC12P31275 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC12P31275 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC12P31275 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC12P31275 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC12P31275 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXC12P31275 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC12P31275 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.69■□□□□ 0.74
HOXC12P31275 AC009086.3-201ENST00000623486 1008 ntBASIC19.69■□□□□ 0.74
HOXC12P31275 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC12P31275 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC12P31275 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC12P31275 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC12P31275 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC12P31275 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC12P31275 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXC12P31275 AC091305.1-201ENST00000479476 895 ntBASIC19.68■□□□□ 0.74
HOXC12P31275 AP001330.3-201ENST00000520123 633 ntBASIC19.68■□□□□ 0.74
HOXC12P31275 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC12P31275 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXC12P31275 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXC12P31275 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.68■□□□□ 0.74
HOXC12P31275 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC12P31275 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC12P31275 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC12P31275 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC12P31275 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC12P31275 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC12P31275 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC12P31275 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HOXC12P31275 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXC12P31275 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HOXC12P31275 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HOXC12P31275 AL162430.1-201ENST00000480705 870 ntBASIC19.67■□□□□ 0.74
HOXC12P31275 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
HOXC12P31275 AC099791.2-201ENST00000605725 427 ntBASIC19.67■□□□□ 0.74
HOXC12P31275 AC087623.3-201ENST00000607047 1098 ntBASIC19.67■□□□□ 0.74
HOXC12P31275 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXC12P31275 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC12P31275 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXC12P31275 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXC12P31275 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC12P31275 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC12P31275 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC12P31275 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC12P31275 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HOXC12P31275 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC12P31275 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC12P31275 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC12P31275 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXC12P31275 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXC12P31275 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXC12P31275 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXC12P31275 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC12P31275 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC12P31275 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC12P31275 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXC12P31275 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC12P31275 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXC12P31275 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
HOXC12P31275 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC12P31275 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXC12P31275 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC12P31275 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC12P31275 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms