Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SDHAP31040 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SDHAP31040 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SDHAP31040 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SDHAP31040 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SDHAP31040 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SDHAP31040 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.97■□□□□ 0.79
SDHAP31040 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SDHAP31040 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.97■□□□□ 0.79
SDHAP31040 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SDHAP31040 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SDHAP31040 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.97■□□□□ 0.79
SDHAP31040 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SDHAP31040 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.96■□□□□ 0.79
SDHAP31040 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SDHAP31040 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SDHAP31040 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SDHAP31040 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SDHAP31040 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SDHAP31040 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SDHAP31040 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.96■□□□□ 0.79
SDHAP31040 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.96■□□□□ 0.79
SDHAP31040 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.96■□□□□ 0.79
SDHAP31040 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.95■□□□□ 0.79
SDHAP31040 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SDHAP31040 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.95■□□□□ 0.78
SDHAP31040 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SDHAP31040 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.95■□□□□ 0.78
SDHAP31040 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SDHAP31040 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.95■□□□□ 0.78
SDHAP31040 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SDHAP31040 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.95■□□□□ 0.78
SDHAP31040 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.95■□□□□ 0.78
SDHAP31040 Z92544.1-202ENST00000571933 1220 ntBASIC19.95■□□□□ 0.78
SDHAP31040 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
SDHAP31040 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SDHAP31040 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.95■□□□□ 0.78
SDHAP31040 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SDHAP31040 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SDHAP31040 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SDHAP31040 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.95■□□□□ 0.78
SDHAP31040 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SDHAP31040 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SDHAP31040 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.94■□□□□ 0.78
SDHAP31040 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SDHAP31040 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SDHAP31040 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SDHAP31040 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SDHAP31040 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SDHAP31040 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.94■□□□□ 0.78
SDHAP31040 KRT125P-201ENST00000546827 989 ntBASIC19.94■□□□□ 0.78
SDHAP31040 AC092028.1-203ENST00000608262 953 ntBASIC19.94■□□□□ 0.78
SDHAP31040 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SDHAP31040 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SDHAP31040 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.94■□□□□ 0.78
SDHAP31040 EP400NL-214ENST00000641289 2402 ntBASIC19.94■□□□□ 0.78
SDHAP31040 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SDHAP31040 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SDHAP31040 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SDHAP31040 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SDHAP31040 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.93■□□□□ 0.78
SDHAP31040 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SDHAP31040 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SDHAP31040 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.93■□□□□ 0.78
SDHAP31040 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
SDHAP31040 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.93■□□□□ 0.78
SDHAP31040 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SDHAP31040 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SDHAP31040 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SDHAP31040 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SDHAP31040 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SDHAP31040 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SDHAP31040 ECEL1P1-201ENST00000373592 1742 ntBASIC19.93■□□□□ 0.78
SDHAP31040 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SDHAP31040 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.93■□□□□ 0.78
SDHAP31040 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SDHAP31040 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SDHAP31040 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.92■□□□□ 0.78
SDHAP31040 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.92■□□□□ 0.78
SDHAP31040 LINC01529-204ENST00000636474 1715 ntBASIC19.92■□□□□ 0.78
SDHAP31040 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SDHAP31040 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SDHAP31040 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SDHAP31040 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SDHAP31040 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
SDHAP31040 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SDHAP31040 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SDHAP31040 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SDHAP31040 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SDHAP31040 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.91■□□□□ 0.78
SDHAP31040 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SDHAP31040 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SDHAP31040 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SDHAP31040 FP325331.1-202ENST00000623531 1380 ntBASIC19.91■□□□□ 0.78
SDHAP31040 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SDHAP31040 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SDHAP31040 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAP31040 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAP31040 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAP31040 AC127496.7-201ENST00000625110 1798 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms