Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
CHRNB4P30926 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.77■□□□□ 0.76
CHRNB4P30926 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNB4P30926 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNB4P30926 IKBKGP1-201ENST00000612193 1073 ntBASIC19.77■□□□□ 0.76
CHRNB4P30926 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.77■□□□□ 0.76
CHRNB4P30926 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHRNB4P30926 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CHRNB4P30926 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNB4P30926 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CHRNB4P30926 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNB4P30926 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNB4P30926 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHRNB4P30926 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.76■□□□□ 0.75
CHRNB4P30926 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNB4P30926 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.76■□□□□ 0.75
CHRNB4P30926 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNB4P30926 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CHRNB4P30926 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.76■□□□□ 0.75
CHRNB4P30926 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNB4P30926 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNB4P30926 AL499627.2-201ENST00000606283 725 ntBASIC19.76■□□□□ 0.75
CHRNB4P30926 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNB4P30926 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
CHRNB4P30926 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNB4P30926 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNB4P30926 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNB4P30926 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNB4P30926 FP325331.1-202ENST00000623531 1380 ntBASIC19.75■□□□□ 0.75
CHRNB4P30926 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNB4P30926 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.75■□□□□ 0.75
CHRNB4P30926 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.75■□□□□ 0.75
CHRNB4P30926 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.75■□□□□ 0.75
CHRNB4P30926 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CHRNB4P30926 MIR6084-201ENST00000622012 110 ntBASIC19.75■□□□□ 0.75
CHRNB4P30926 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.75■□□□□ 0.75
CHRNB4P30926 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNB4P30926 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNB4P30926 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNB4P30926 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CHRNB4P30926 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CHRNB4P30926 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CHRNB4P30926 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNB4P30926 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNB4P30926 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNB4P30926 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CHRNB4P30926 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNB4P30926 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNB4P30926 OR2I1P-207ENST00000453522 948 ntBASIC19.74■□□□□ 0.75
CHRNB4P30926 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.74■□□□□ 0.75
CHRNB4P30926 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNB4P30926 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.74■□□□□ 0.75
CHRNB4P30926 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNB4P30926 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNB4P30926 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNB4P30926 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.73■□□□□ 0.75
CHRNB4P30926 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNB4P30926 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNB4P30926 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNB4P30926 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNB4P30926 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.73■□□□□ 0.75
CHRNB4P30926 AP003733.4-201ENST00000623785 1697 ntBASIC19.73■□□□□ 0.75
CHRNB4P30926 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CHRNB4P30926 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.73■□□□□ 0.75
CHRNB4P30926 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.73■□□□□ 0.75
CHRNB4P30926 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CHRNB4P30926 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.73■□□□□ 0.75
CHRNB4P30926 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNB4P30926 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.73■□□□□ 0.75
CHRNB4P30926 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB4P30926 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CHRNB4P30926 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB4P30926 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB4P30926 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
CHRNB4P30926 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB4P30926 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CHRNB4P30926 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB4P30926 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB4P30926 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB4P30926 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB4P30926 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB4P30926 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB4P30926 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNB4P30926 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNB4P30926 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNB4P30926 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.71■□□□□ 0.75
CHRNB4P30926 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNB4P30926 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNB4P30926 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.71■□□□□ 0.75
CHRNB4P30926 DUX4L4-201ENST00000566884 1269 ntBASIC19.71■□□□□ 0.75
CHRNB4P30926 CCDC92B-201ENST00000575506 885 ntBASIC19.71■□□□□ 0.75
CHRNB4P30926 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNB4P30926 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNB4P30926 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNB4P30926 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNB4P30926 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNB4P30926 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNB4P30926 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNB4P30926 LINC02228-203ENST00000641970 1355 ntBASIC19.7■□□□□ 0.74
CHRNB4P30926 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms