Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
GDF1P27539 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
GDF1P27539 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF1P27539 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF1P27539 AC079630.1-202ENST00000618127 1840 ntBASIC20.25■□□□□ 0.83
GDF1P27539 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF1P27539 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF1P27539 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GDF1P27539 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
GDF1P27539 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF1P27539 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.24■□□□□ 0.83
GDF1P27539 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.24■□□□□ 0.83
GDF1P27539 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
GDF1P27539 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GDF1P27539 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF1P27539 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF1P27539 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
GDF1P27539 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GDF1P27539 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF1P27539 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.23■□□□□ 0.83
GDF1P27539 AC133637.1-201ENST00000624115 1537 ntBASIC20.23■□□□□ 0.83
GDF1P27539 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF1P27539 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF1P27539 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF1P27539 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF1P27539 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
GDF1P27539 MIR935-201ENST00000401179 91 ntBASIC20.23■□□□□ 0.83
GDF1P27539 AC099791.1-201ENST00000416440 715 ntBASIC20.23■□□□□ 0.83
GDF1P27539 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GDF1P27539 AC105265.2-201ENST00000467189 838 ntBASIC20.23■□□□□ 0.83
GDF1P27539 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
GDF1P27539 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.23■□□□□ 0.83
GDF1P27539 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF1P27539 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF1P27539 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF1P27539 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF1P27539 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GDF1P27539 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GDF1P27539 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF1P27539 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
GDF1P27539 RASA4CP-201ENST00000424092 1398 ntBASIC20.22■□□□□ 0.83
GDF1P27539 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.22■□□□□ 0.83
GDF1P27539 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF1P27539 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF1P27539 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.22■□□□□ 0.83
GDF1P27539 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF1P27539 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.22■□□□□ 0.83
GDF1P27539 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.22■□□□□ 0.83
GDF1P27539 CA15P2-201ENST00000611168 834 ntBASIC20.22■□□□□ 0.83
GDF1P27539 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF1P27539 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF1P27539 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF1P27539 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.22■□□□□ 0.83
GDF1P27539 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDF1P27539 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDF1P27539 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
GDF1P27539 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
GDF1P27539 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.21■□□□□ 0.83
GDF1P27539 AL499627.2-201ENST00000606283 725 ntBASIC20.21■□□□□ 0.83
GDF1P27539 AC233992.3-201ENST00000607491 485 ntBASIC20.21■□□□□ 0.83
GDF1P27539 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDF1P27539 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.21■□□□□ 0.83
GDF1P27539 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GDF1P27539 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
GDF1P27539 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
GDF1P27539 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF1P27539 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.2■□□□□ 0.82
GDF1P27539 BX842568.3-201ENST00000418104 571 ntBASIC20.2■□□□□ 0.82
GDF1P27539 ZNRF2P3-201ENST00000424200 374 ntBASIC20.2■□□□□ 0.82
GDF1P27539 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.2■□□□□ 0.82
GDF1P27539 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.2■□□□□ 0.82
GDF1P27539 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF1P27539 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.2■□□□□ 0.82
GDF1P27539 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.19■□□□□ 0.82
GDF1P27539 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF1P27539 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
GDF1P27539 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF1P27539 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
GDF1P27539 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF1P27539 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF1P27539 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.19■□□□□ 0.82
GDF1P27539 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.19■□□□□ 0.82
GDF1P27539 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF1P27539 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.19■□□□□ 0.82
GDF1P27539 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GDF1P27539 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.19■□□□□ 0.82
GDF1P27539 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF1P27539 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GDF1P27539 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF1P27539 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.19■□□□□ 0.82
GDF1P27539 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF1P27539 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF1P27539 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF1P27539 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GDF1P27539 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF1P27539 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF1P27539 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.18■□□□□ 0.82
GDF1P27539 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GDF1P27539 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.18■□□□□ 0.82
GDF1P27539 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms