Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.87■□□□□ 0.61
COL8A2P25067 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL8A2P25067 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.87■□□□□ 0.61
COL8A2P25067 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
COL8A2P25067 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL8A2P25067 ABCB10P4-201ENST00000566803 2184 ntBASIC18.86■□□□□ 0.61
COL8A2P25067 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL8A2P25067 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL8A2P25067 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL8A2P25067 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL8A2P25067 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL8A2P25067 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
COL8A2P25067 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
COL8A2P25067 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.86■□□□□ 0.61
COL8A2P25067 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
COL8A2P25067 FP325331.1-202ENST00000623531 1380 ntBASIC18.86■□□□□ 0.61
COL8A2P25067 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL8A2P25067 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL8A2P25067 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.86■□□□□ 0.61
COL8A2P25067 AC099791.1-201ENST00000416440 715 ntBASIC18.86■□□□□ 0.61
COL8A2P25067 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.86■□□□□ 0.61
COL8A2P25067 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL8A2P25067 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.86■□□□□ 0.61
COL8A2P25067 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.86■□□□□ 0.61
COL8A2P25067 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL8A2P25067 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.86■□□□□ 0.61
COL8A2P25067 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL8A2P25067 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL8A2P25067 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COL8A2P25067 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL8A2P25067 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.85■□□□□ 0.61
COL8A2P25067 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL8A2P25067 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL8A2P25067 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL8A2P25067 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.85■□□□□ 0.61
COL8A2P25067 AC027682.1-201ENST00000562846 899 ntBASIC18.85■□□□□ 0.61
COL8A2P25067 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL8A2P25067 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.85■□□□□ 0.61
COL8A2P25067 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL8A2P25067 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL8A2P25067 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL8A2P25067 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL8A2P25067 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
COL8A2P25067 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL8A2P25067 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL8A2P25067 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL8A2P25067 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
COL8A2P25067 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.84■□□□□ 0.61
COL8A2P25067 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL8A2P25067 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL8A2P25067 AC233992.3-201ENST00000607491 485 ntBASIC18.84■□□□□ 0.61
COL8A2P25067 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL8A2P25067 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL8A2P25067 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL8A2P25067 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
COL8A2P25067 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL8A2P25067 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL8A2P25067 AC144652.1-201ENST00000609974 1624 ntBASIC18.83■□□□□ 0.61
COL8A2P25067 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.83■□□□□ 0.6
COL8A2P25067 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.83■□□□□ 0.6
COL8A2P25067 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.83■□□□□ 0.6
COL8A2P25067 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL8A2P25067 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL8A2P25067 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL8A2P25067 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL8A2P25067 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL8A2P25067 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL8A2P25067 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL8A2P25067 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL8A2P25067 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL8A2P25067 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL8A2P25067 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL8A2P25067 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL8A2P25067 BX842568.3-201ENST00000418104 571 ntBASIC18.82■□□□□ 0.6
COL8A2P25067 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL8A2P25067 DUX4L4-201ENST00000566884 1269 ntBASIC18.82■□□□□ 0.6
COL8A2P25067 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.82■□□□□ 0.6
COL8A2P25067 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
COL8A2P25067 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.82■□□□□ 0.6
COL8A2P25067 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL8A2P25067 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL8A2P25067 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.81■□□□□ 0.6
COL8A2P25067 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL8A2P25067 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
COL8A2P25067 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL8A2P25067 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.81■□□□□ 0.6
COL8A2P25067 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL8A2P25067 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.81■□□□□ 0.6
COL8A2P25067 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL8A2P25067 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.81■□□□□ 0.6
COL8A2P25067 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL8A2P25067 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL8A2P25067 LINC01529-204ENST00000636474 1715 ntBASIC18.8■□□□□ 0.6
COL8A2P25067 AC133637.1-201ENST00000624115 1537 ntBASIC18.8■□□□□ 0.6
COL8A2P25067 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL8A2P25067 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.8■□□□□ 0.6
COL8A2P25067 AL499627.2-201ENST00000606283 725 ntBASIC18.8■□□□□ 0.6
COL8A2P25067 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
COL8A2P25067 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.8■□□□□ 0.6
COL8A2P25067 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms