Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.56■■□□□ 1.36
MMP8P22894 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.56■■□□□ 1.36
MMP8P22894 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.56■■□□□ 1.36
MMP8P22894 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
MMP8P22894 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.56■■□□□ 1.36
MMP8P22894 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.56■■□□□ 1.36
MMP8P22894 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.55■■□□□ 1.36
MMP8P22894 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
MMP8P22894 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.55■■□□□ 1.36
MMP8P22894 DUX4L4-201ENST00000566884 1269 ntBASIC23.55■■□□□ 1.36
MMP8P22894 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.55■■□□□ 1.36
MMP8P22894 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
MMP8P22894 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.54■■□□□ 1.36
MMP8P22894 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.54■■□□□ 1.36
MMP8P22894 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
MMP8P22894 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.54■■□□□ 1.36
MMP8P22894 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
MMP8P22894 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
MMP8P22894 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.54■■□□□ 1.36
MMP8P22894 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
MMP8P22894 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
MMP8P22894 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
MMP8P22894 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
MMP8P22894 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MMP8P22894 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MMP8P22894 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MMP8P22894 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MMP8P22894 AL117332.1-201ENST00000622628 974 ntBASIC23.53■■□□□ 1.36
MMP8P22894 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MMP8P22894 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MMP8P22894 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.52■■□□□ 1.36
MMP8P22894 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.52■■□□□ 1.36
MMP8P22894 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
MMP8P22894 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MMP8P22894 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.52■■□□□ 1.36
MMP8P22894 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.52■■□□□ 1.36
MMP8P22894 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
MMP8P22894 MIR3621-201ENST00000580529 85 ntBASIC23.52■■□□□ 1.36
MMP8P22894 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.52■■□□□ 1.36
MMP8P22894 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
MMP8P22894 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
MMP8P22894 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
MMP8P22894 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
MMP8P22894 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
MMP8P22894 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MMP8P22894 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MMP8P22894 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MMP8P22894 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MMP8P22894 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MMP8P22894 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MMP8P22894 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.51■■□□□ 1.35
MMP8P22894 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MMP8P22894 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
MMP8P22894 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
MMP8P22894 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
MMP8P22894 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.5■■□□□ 1.35
MMP8P22894 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
MMP8P22894 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
MMP8P22894 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MMP8P22894 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
MMP8P22894 AL356441.2-201ENST00000443009 864 ntBASIC23.5■■□□□ 1.35
MMP8P22894 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.49■■□□□ 1.35
MMP8P22894 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
MMP8P22894 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
MMP8P22894 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
MMP8P22894 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MMP8P22894 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MMP8P22894 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
MMP8P22894 AL356740.2-201ENST00000601559 647 ntBASIC23.48■■□□□ 1.35
MMP8P22894 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MMP8P22894 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.48■■□□□ 1.35
MMP8P22894 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
MMP8P22894 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
MMP8P22894 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
MMP8P22894 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.47■■□□□ 1.35
MMP8P22894 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
MMP8P22894 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
MMP8P22894 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
MMP8P22894 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.47■■□□□ 1.35
MMP8P22894 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
MMP8P22894 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
MMP8P22894 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.47■■□□□ 1.35
MMP8P22894 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
MMP8P22894 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
MMP8P22894 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
MMP8P22894 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
MMP8P22894 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
MMP8P22894 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
MMP8P22894 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.46■■□□□ 1.35
MMP8P22894 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.46■■□□□ 1.35
MMP8P22894 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.46■■□□□ 1.35
MMP8P22894 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.46■■□□□ 1.35
MMP8P22894 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
MMP8P22894 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
MMP8P22894 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.45■■□□□ 1.35
MMP8P22894 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
MMP8P22894 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
MMP8P22894 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
MMP8P22894 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
MMP8P22894 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms