Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
KCNA3P22001 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
KCNA3P22001 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
KCNA3P22001 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
KCNA3P22001 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.84■■■□□ 2.05
KCNA3P22001 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
KCNA3P22001 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
KCNA3P22001 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC27.83■■■□□ 2.05
KCNA3P22001 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
KCNA3P22001 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC27.83■■■□□ 2.05
KCNA3P22001 TSPY20P-201ENST00000450910 630 ntBASIC27.83■■■□□ 2.05
KCNA3P22001 CD99P1-205ENST00000527459 561 ntBASIC27.83■■■□□ 2.05
KCNA3P22001 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC27.83■■■□□ 2.05
KCNA3P22001 ALDH1A3-203ENST00000557963 1670 ntBASIC27.83■■■□□ 2.05
KCNA3P22001 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
KCNA3P22001 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
KCNA3P22001 AL161729.1-201ENST00000604104 1402 ntBASIC27.83■■■□□ 2.05
KCNA3P22001 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
KCNA3P22001 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KCNA3P22001 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
KCNA3P22001 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC27.82■■■□□ 2.04
KCNA3P22001 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
KCNA3P22001 COX20-201ENST00000366528 568 ntTSL 2 BASIC27.82■■■□□ 2.04
KCNA3P22001 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
KCNA3P22001 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC27.82■■■□□ 2.04
KCNA3P22001 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KCNA3P22001 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.82■■■□□ 2.04
KCNA3P22001 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KCNA3P22001 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
KCNA3P22001 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC27.81■■■□□ 2.04
KCNA3P22001 WT1-AS_3.1-201ENST00000613262 234 ntBASIC27.81■■■□□ 2.04
KCNA3P22001 GAMT-205ENST00000640762 751 ntTSL 5 BASIC27.81■■■□□ 2.04
KCNA3P22001 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
KCNA3P22001 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
KCNA3P22001 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC27.8■■■□□ 2.04
KCNA3P22001 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
KCNA3P22001 AC092803.2-201ENST00000564287 1899 ntBASIC27.8■■■□□ 2.04
KCNA3P22001 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
KCNA3P22001 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
KCNA3P22001 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
KCNA3P22001 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
KCNA3P22001 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
KCNA3P22001 EI24-204ENST00000527235 1625 ntTSL 5 BASIC27.78■■■□□ 2.04
KCNA3P22001 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
KCNA3P22001 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC27.78■■■□□ 2.04
KCNA3P22001 AC142086.2-201ENST00000569753 217 ntBASIC27.78■■■□□ 2.04
KCNA3P22001 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC27.78■■■□□ 2.04
KCNA3P22001 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC27.78■■■□□ 2.04
KCNA3P22001 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
KCNA3P22001 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
KCNA3P22001 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
KCNA3P22001 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
KCNA3P22001 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
KCNA3P22001 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
KCNA3P22001 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
KCNA3P22001 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC27.77■■■□□ 2.04
KCNA3P22001 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
KCNA3P22001 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
KCNA3P22001 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
KCNA3P22001 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
KCNA3P22001 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
KCNA3P22001 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
KCNA3P22001 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.04
KCNA3P22001 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
KCNA3P22001 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
KCNA3P22001 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC27.76■■■□□ 2.03
KCNA3P22001 GPX1P1-201ENST00000388829 606 ntBASIC27.76■■■□□ 2.03
KCNA3P22001 MFF-208ENST00000409616 1247 ntTSL 5 BASIC27.76■■■□□ 2.03
KCNA3P22001 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC27.76■■■□□ 2.03
KCNA3P22001 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC27.76■■■□□ 2.03
KCNA3P22001 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
KCNA3P22001 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC27.75■■■□□ 2.03
KCNA3P22001 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
KCNA3P22001 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
KCNA3P22001 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC27.75■■■□□ 2.03
KCNA3P22001 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
KCNA3P22001 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC27.75■■■□□ 2.03
KCNA3P22001 MIR663A-201ENST00000385250 93 ntBASIC27.75■■■□□ 2.03
KCNA3P22001 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
KCNA3P22001 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
KCNA3P22001 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
KCNA3P22001 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
KCNA3P22001 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
KCNA3P22001 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.74■■■□□ 2.03
KCNA3P22001 METTL26-203ENST00000397664 604 ntTSL 2 BASIC27.74■■■□□ 2.03
KCNA3P22001 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
KCNA3P22001 AC011767.1-201ENST00000617410 1153 ntBASIC27.74■■■□□ 2.03
KCNA3P22001 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
KCNA3P22001 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
KCNA3P22001 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
KCNA3P22001 APTR-205ENST00000447009 902 ntTSL 2 BASIC27.73■■■□□ 2.03
KCNA3P22001 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC27.73■■■□□ 2.03
KCNA3P22001 DUX4L4-201ENST00000566884 1269 ntBASIC27.73■■■□□ 2.03
KCNA3P22001 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
KCNA3P22001 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
KCNA3P22001 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.73■■■□□ 2.03
KCNA3P22001 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.73■■■□□ 2.03
KCNA3P22001 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.73■■■□□ 2.03
KCNA3P22001 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.73■■■□□ 2.03
KCNA3P22001 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms