Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AC005181.1-201ENST00000604782 1256 ntBASIC21.23■□□□□ 0.99
TPRP12270 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TPRP12270 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPRP12270 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.23■□□□□ 0.99
TPRP12270 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.23■□□□□ 0.99
TPRP12270 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TPRP12270 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TPRP12270 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPRP12270 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPRP12270 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPRP12270 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPRP12270 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPRP12270 AC007322.1-201ENST00000426983 750 ntBASIC21.22■□□□□ 0.99
TPRP12270 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
TPRP12270 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPRP12270 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.21■□□□□ 0.99
TPRP12270 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.21■□□□□ 0.99
TPRP12270 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.21■□□□□ 0.99
TPRP12270 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TPRP12270 ESRRAP1-201ENST00000400596 1257 ntBASIC21.21■□□□□ 0.99
TPRP12270 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TPRP12270 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.21■□□□□ 0.99
TPRP12270 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPRP12270 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.21■□□□□ 0.99
TPRP12270 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPRP12270 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TPRP12270 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPRP12270 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TPRP12270 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.21■□□□□ 0.99
TPRP12270 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.21■□□□□ 0.99
TPRP12270 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.21■□□□□ 0.99
TPRP12270 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TPRP12270 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.2■□□□□ 0.98
TPRP12270 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.19■□□□□ 0.98
TPRP12270 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.19■□□□□ 0.98
TPRP12270 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TPRP12270 AL445228.2-201ENST00000605589 952 ntBASIC21.19■□□□□ 0.98
TPRP12270 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.19■□□□□ 0.98
TPRP12270 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TPRP12270 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
TPRP12270 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TPRP12270 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TPRP12270 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TPRP12270 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TPRP12270 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.19■□□□□ 0.98
TPRP12270 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
TPRP12270 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.18■□□□□ 0.98
TPRP12270 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TPRP12270 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.18■□□□□ 0.98
TPRP12270 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TPRP12270 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPRP12270 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPRP12270 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TPRP12270 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPRP12270 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.18■□□□□ 0.98
TPRP12270 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
TPRP12270 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TPRP12270 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
TPRP12270 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPRP12270 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.17■□□□□ 0.98
TPRP12270 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.17■□□□□ 0.98
TPRP12270 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPRP12270 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPRP12270 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPRP12270 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPRP12270 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.16■□□□□ 0.98
TPRP12270 UNC93B4-201ENST00000505679 747 ntBASIC21.16■□□□□ 0.98
TPRP12270 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
TPRP12270 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
TPRP12270 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TPRP12270 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPRP12270 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPRP12270 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TPRP12270 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPRP12270 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.16■□□□□ 0.98
TPRP12270 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.16■□□□□ 0.98
TPRP12270 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPRP12270 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.16■□□□□ 0.98
TPRP12270 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPRP12270 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPRP12270 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TPRP12270 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPRP12270 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.15■□□□□ 0.98
TPRP12270 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.15■□□□□ 0.98
TPRP12270 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.15■□□□□ 0.98
TPRP12270 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
TPRP12270 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPRP12270 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TPRP12270 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TPRP12270 CNN2P6-201ENST00000439038 900 ntBASIC21.15■□□□□ 0.98
TPRP12270 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.15■□□□□ 0.98
TPRP12270 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TPRP12270 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPRP12270 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.14■□□□□ 0.98
TPRP12270 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TPRP12270 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.14■□□□□ 0.97
TPRP12270 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.14■□□□□ 0.97
TPRP12270 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.14■□□□□ 0.97
TPRP12270 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TPRP12270 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms