Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBL4AP11441 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBL4AP11441 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBL4AP11441 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBL4AP11441 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBL4AP11441 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBL4AP11441 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.57■□□□□ 0.88
UBL4AP11441 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
UBL4AP11441 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBL4AP11441 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBL4AP11441 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
UBL4AP11441 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBL4AP11441 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBL4AP11441 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.56■□□□□ 0.88
UBL4AP11441 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBL4AP11441 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.56■□□□□ 0.88
UBL4AP11441 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBL4AP11441 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBL4AP11441 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.56■□□□□ 0.88
UBL4AP11441 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.56■□□□□ 0.88
UBL4AP11441 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.56■□□□□ 0.88
UBL4AP11441 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBL4AP11441 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBL4AP11441 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBL4AP11441 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
UBL4AP11441 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.56■□□□□ 0.88
UBL4AP11441 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBL4AP11441 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
UBL4AP11441 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.55■□□□□ 0.88
UBL4AP11441 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBL4AP11441 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBL4AP11441 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.55■□□□□ 0.88
UBL4AP11441 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.55■□□□□ 0.88
UBL4AP11441 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.55■□□□□ 0.88
UBL4AP11441 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
UBL4AP11441 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.55■□□□□ 0.88
UBL4AP11441 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBL4AP11441 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.55■□□□□ 0.88
UBL4AP11441 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBL4AP11441 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBL4AP11441 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBL4AP11441 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.54■□□□□ 0.88
UBL4AP11441 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBL4AP11441 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBL4AP11441 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBL4AP11441 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
UBL4AP11441 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
UBL4AP11441 AL121603.2-201ENST00000557373 2117 ntBASIC20.54■□□□□ 0.88
UBL4AP11441 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
UBL4AP11441 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.54■□□□□ 0.88
UBL4AP11441 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
UBL4AP11441 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBL4AP11441 AC144652.1-201ENST00000609974 1624 ntBASIC20.53■□□□□ 0.88
UBL4AP11441 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBL4AP11441 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBL4AP11441 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBL4AP11441 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.53■□□□□ 0.88
UBL4AP11441 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.53■□□□□ 0.88
UBL4AP11441 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.53■□□□□ 0.88
UBL4AP11441 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBL4AP11441 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBL4AP11441 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
UBL4AP11441 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBL4AP11441 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.53■□□□□ 0.88
UBL4AP11441 AC009102.2-201ENST00000606772 1639 ntBASIC20.53■□□□□ 0.88
UBL4AP11441 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.53■□□□□ 0.88
UBL4AP11441 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.52■□□□□ 0.88
UBL4AP11441 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBL4AP11441 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.52■□□□□ 0.88
UBL4AP11441 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
UBL4AP11441 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBL4AP11441 RNF165-205ENST00000588679 2904 ntBASIC20.52■□□□□ 0.88
UBL4AP11441 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBL4AP11441 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBL4AP11441 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBL4AP11441 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBL4AP11441 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.51■□□□□ 0.87
UBL4AP11441 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.51■□□□□ 0.87
UBL4AP11441 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBL4AP11441 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBL4AP11441 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.51■□□□□ 0.87
UBL4AP11441 AL356441.2-201ENST00000443009 864 ntBASIC20.5■□□□□ 0.87
UBL4AP11441 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBL4AP11441 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBL4AP11441 AL353803.4-201ENST00000565882 1934 ntBASIC20.5■□□□□ 0.87
UBL4AP11441 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBL4AP11441 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBL4AP11441 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.5■□□□□ 0.87
UBL4AP11441 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBL4AP11441 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
UBL4AP11441 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBL4AP11441 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBL4AP11441 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBL4AP11441 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBL4AP11441 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBL4AP11441 SLC25A24-204ENST00000569674 2357 ntBASIC20.49■□□□□ 0.87
UBL4AP11441 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.49■□□□□ 0.87
UBL4AP11441 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.49■□□□□ 0.87
UBL4AP11441 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.49■□□□□ 0.87
UBL4AP11441 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms