Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAB40ALP0C0E4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB40ALP0C0E4 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.04■□□□□ 0.96
RAB40ALP0C0E4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB40ALP0C0E4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAB40ALP0C0E4 AC138932.3-201ENST00000567634 1902 ntBASIC21.04■□□□□ 0.96
RAB40ALP0C0E4 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.04■□□□□ 0.96
RAB40ALP0C0E4 DUX4L4-201ENST00000566884 1269 ntBASIC21.04■□□□□ 0.96
RAB40ALP0C0E4 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.04■□□□□ 0.96
RAB40ALP0C0E4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB40ALP0C0E4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.04■□□□□ 0.96
RAB40ALP0C0E4 AC133637.1-201ENST00000624115 1537 ntBASIC21.04■□□□□ 0.96
RAB40ALP0C0E4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAB40ALP0C0E4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB40ALP0C0E4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB40ALP0C0E4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
RAB40ALP0C0E4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB40ALP0C0E4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RAB40ALP0C0E4 SLC47A1P1-202ENST00000449666 945 ntBASIC21.03■□□□□ 0.96
RAB40ALP0C0E4 AC087623.3-201ENST00000607047 1098 ntBASIC21.03■□□□□ 0.96
RAB40ALP0C0E4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB40ALP0C0E4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB40ALP0C0E4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB40ALP0C0E4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB40ALP0C0E4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB40ALP0C0E4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB40ALP0C0E4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB40ALP0C0E4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.02■□□□□ 0.96
RAB40ALP0C0E4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RAB40ALP0C0E4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB40ALP0C0E4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB40ALP0C0E4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB40ALP0C0E4 AL139125.2-201ENST00000623134 1869 ntBASIC21.02■□□□□ 0.96
RAB40ALP0C0E4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RAB40ALP0C0E4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.02■□□□□ 0.96
RAB40ALP0C0E4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.02■□□□□ 0.95
RAB40ALP0C0E4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
RAB40ALP0C0E4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB40ALP0C0E4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RAB40ALP0C0E4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RAB40ALP0C0E4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.01■□□□□ 0.95
RAB40ALP0C0E4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.01■□□□□ 0.95
RAB40ALP0C0E4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.01■□□□□ 0.95
RAB40ALP0C0E4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.01■□□□□ 0.95
RAB40ALP0C0E4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB40ALP0C0E4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.01■□□□□ 0.95
RAB40ALP0C0E4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB40ALP0C0E4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB40ALP0C0E4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
RAB40ALP0C0E4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB40ALP0C0E4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB40ALP0C0E4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RAB40ALP0C0E4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21■□□□□ 0.95
RAB40ALP0C0E4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
RAB40ALP0C0E4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21■□□□□ 0.95
RAB40ALP0C0E4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAB40ALP0C0E4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21■□□□□ 0.95
RAB40ALP0C0E4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAB40ALP0C0E4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAB40ALP0C0E4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21■□□□□ 0.95
RAB40ALP0C0E4 TSPY26P-201ENST00000476365 1326 ntBASIC21■□□□□ 0.95
RAB40ALP0C0E4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB40ALP0C0E4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB40ALP0C0E4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RAB40ALP0C0E4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB40ALP0C0E4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.99■□□□□ 0.95
RAB40ALP0C0E4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.99■□□□□ 0.95
RAB40ALP0C0E4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAB40ALP0C0E4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB40ALP0C0E4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB40ALP0C0E4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAB40ALP0C0E4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB40ALP0C0E4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB40ALP0C0E4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB40ALP0C0E4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RAB40ALP0C0E4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB40ALP0C0E4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.98■□□□□ 0.95
RAB40ALP0C0E4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB40ALP0C0E4 IGHV3-19-201ENST00000521488 291 ntBASIC20.98■□□□□ 0.95
RAB40ALP0C0E4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.98■□□□□ 0.95
RAB40ALP0C0E4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.98■□□□□ 0.95
RAB40ALP0C0E4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB40ALP0C0E4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB40ALP0C0E4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
RAB40ALP0C0E4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB40ALP0C0E4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB40ALP0C0E4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB40ALP0C0E4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.97■□□□□ 0.95
RAB40ALP0C0E4 OR2I1P-207ENST00000453522 948 ntBASIC20.97■□□□□ 0.95
RAB40ALP0C0E4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB40ALP0C0E4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.97■□□□□ 0.95
RAB40ALP0C0E4 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.97■□□□□ 0.95
RAB40ALP0C0E4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RAB40ALP0C0E4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB40ALP0C0E4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB40ALP0C0E4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB40ALP0C0E4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB40ALP0C0E4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB40ALP0C0E4 AC144652.1-201ENST00000609974 1624 ntBASIC20.96■□□□□ 0.95
RAB40ALP0C0E4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms