Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.58■■□□□ 1.21
MMP2P08253 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
MMP2P08253 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
MMP2P08253 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
MMP2P08253 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.58■■□□□ 1.2
MMP2P08253 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
MMP2P08253 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
MMP2P08253 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP2P08253 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP2P08253 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
MMP2P08253 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
MMP2P08253 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.57■■□□□ 1.2
MMP2P08253 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
MMP2P08253 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
MMP2P08253 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MMP2P08253 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.57■■□□□ 1.2
MMP2P08253 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MMP2P08253 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.57■■□□□ 1.2
MMP2P08253 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.57■■□□□ 1.2
MMP2P08253 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP2P08253 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP2P08253 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.57■■□□□ 1.2
MMP2P08253 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
MMP2P08253 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.56■■□□□ 1.2
MMP2P08253 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MMP2P08253 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.56■■□□□ 1.2
MMP2P08253 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.56■■□□□ 1.2
MMP2P08253 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
MMP2P08253 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
MMP2P08253 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.56■■□□□ 1.2
MMP2P08253 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MMP2P08253 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.56■■□□□ 1.2
MMP2P08253 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
MMP2P08253 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP2P08253 AC006455.2-201ENST00000429931 906 ntBASIC22.55■■□□□ 1.2
MMP2P08253 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
MMP2P08253 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP2P08253 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP2P08253 AC068473.5-201ENST00000616428 2072 ntBASIC22.54■■□□□ 1.2
MMP2P08253 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP2P08253 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP2P08253 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP2P08253 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.54■■□□□ 1.2
MMP2P08253 AC099791.2-201ENST00000605725 427 ntBASIC22.54■■□□□ 1.2
MMP2P08253 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.54■■□□□ 1.2
MMP2P08253 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP2P08253 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.54■■□□□ 1.2
MMP2P08253 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP2P08253 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.53■■□□□ 1.2
MMP2P08253 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
MMP2P08253 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.53■■□□□ 1.2
MMP2P08253 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.53■■□□□ 1.2
MMP2P08253 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
MMP2P08253 SRD5A1P1-201ENST00000442297 786 ntBASIC22.53■■□□□ 1.2
MMP2P08253 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.53■■□□□ 1.2
MMP2P08253 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MMP2P08253 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
MMP2P08253 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.53■■□□□ 1.2
MMP2P08253 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MMP2P08253 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
MMP2P08253 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MMP2P08253 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.52■■□□□ 1.2
MMP2P08253 AC241377.3-202ENST00000626088 1088 ntBASIC22.52■■□□□ 1.2
MMP2P08253 AC241585.3-202ENST00000628937 1088 ntBASIC22.52■■□□□ 1.2
MMP2P08253 AC245100.8-202ENST00000629247 1058 ntBASIC22.52■■□□□ 1.2
MMP2P08253 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MMP2P08253 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.52■■□□□ 1.2
MMP2P08253 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MMP2P08253 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.52■■□□□ 1.2
MMP2P08253 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.52■■□□□ 1.2
MMP2P08253 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
MMP2P08253 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.52■■□□□ 1.2
MMP2P08253 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.52■■□□□ 1.2
MMP2P08253 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
MMP2P08253 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
MMP2P08253 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.51■■□□□ 1.19
MMP2P08253 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
MMP2P08253 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
MMP2P08253 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
MMP2P08253 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
MMP2P08253 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
MMP2P08253 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
MMP2P08253 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MMP2P08253 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MMP2P08253 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
MMP2P08253 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MMP2P08253 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.5■■□□□ 1.19
MMP2P08253 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.5■■□□□ 1.19
MMP2P08253 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
MMP2P08253 AC009086.3-201ENST00000623486 1008 ntBASIC22.5■■□□□ 1.19
MMP2P08253 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MMP2P08253 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.5■■□□□ 1.19
MMP2P08253 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.5■■□□□ 1.19
MMP2P08253 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.5■■□□□ 1.19
MMP2P08253 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
MMP2P08253 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MMP2P08253 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.49■■□□□ 1.19
MMP2P08253 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
MMP2P08253 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
MMP2P08253 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms