Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.89■■□□□ 1.41
RB1P06400 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RB1P06400 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.89■■□□□ 1.41
RB1P06400 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.89■■□□□ 1.41
RB1P06400 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RB1P06400 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.88■■□□□ 1.41
RB1P06400 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RB1P06400 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RB1P06400 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
RB1P06400 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RB1P06400 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
RB1P06400 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.88■■□□□ 1.41
RB1P06400 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RB1P06400 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RB1P06400 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RB1P06400 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
RB1P06400 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
RB1P06400 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.87■■□□□ 1.41
RB1P06400 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RB1P06400 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RB1P06400 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.87■■□□□ 1.41
RB1P06400 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.87■■□□□ 1.41
RB1P06400 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.87■■□□□ 1.41
RB1P06400 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RB1P06400 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.87■■□□□ 1.41
RB1P06400 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RB1P06400 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RB1P06400 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RB1P06400 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RB1P06400 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.86■■□□□ 1.41
RB1P06400 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.86■■□□□ 1.41
RB1P06400 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RB1P06400 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.86■■□□□ 1.41
RB1P06400 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.86■■□□□ 1.41
RB1P06400 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RB1P06400 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
RB1P06400 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.85■■□□□ 1.41
RB1P06400 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.85■■□□□ 1.41
RB1P06400 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RB1P06400 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
RB1P06400 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RB1P06400 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RB1P06400 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.84■■□□□ 1.41
RB1P06400 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RB1P06400 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
RB1P06400 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RB1P06400 AC016769.1-201ENST00000409132 1010 ntBASIC23.84■■□□□ 1.41
RB1P06400 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.84■■□□□ 1.41
RB1P06400 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.84■■□□□ 1.41
RB1P06400 RAP2CP1-201ENST00000605103 478 ntBASIC23.84■■□□□ 1.41
RB1P06400 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RB1P06400 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.84■■□□□ 1.41
RB1P06400 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RB1P06400 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RB1P06400 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.83■■□□□ 1.41
RB1P06400 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RB1P06400 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.83■■□□□ 1.41
RB1P06400 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.83■■□□□ 1.41
RB1P06400 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.83■■□□□ 1.41
RB1P06400 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.83■■□□□ 1.41
RB1P06400 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
RB1P06400 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RB1P06400 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RB1P06400 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RB1P06400 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RB1P06400 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RB1P06400 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.82■■□□□ 1.4
RB1P06400 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RB1P06400 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RB1P06400 AC137761.2-201ENST00000561729 223 ntBASIC23.82■■□□□ 1.4
RB1P06400 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.82■■□□□ 1.4
RB1P06400 AC145350.3-201ENST00000569033 163 ntBASIC23.82■■□□□ 1.4
RB1P06400 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RB1P06400 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RB1P06400 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RB1P06400 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RB1P06400 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RB1P06400 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.82■■□□□ 1.4
RB1P06400 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RB1P06400 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
RB1P06400 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RB1P06400 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RB1P06400 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.81■■□□□ 1.4
RB1P06400 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RB1P06400 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.81■■□□□ 1.4
RB1P06400 CDCA4P2-201ENST00000441182 718 ntBASIC23.81■■□□□ 1.4
RB1P06400 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.81■■□□□ 1.4
RB1P06400 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RB1P06400 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.81■■□□□ 1.4
RB1P06400 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.81■■□□□ 1.4
RB1P06400 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.81■■□□□ 1.4
RB1P06400 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.81■■□□□ 1.4
RB1P06400 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
RB1P06400 AC145676.1-201ENST00000514988 2004 ntBASIC23.81■■□□□ 1.4
RB1P06400 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RB1P06400 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RB1P06400 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RB1P06400 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RB1P06400 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RB1P06400 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms