Protein–RNA interactions for Protein: P04818

TYMS, Thymidylate synthase, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TYMSP04818 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TYMSP04818 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.14■□□□□ 0.33
TYMSP04818 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.14■□□□□ 0.33
TYMSP04818 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TYMSP04818 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TYMSP04818 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TYMSP04818 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TYMSP04818 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TYMSP04818 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TYMSP04818 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TYMSP04818 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
TYMSP04818 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TYMSP04818 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TYMSP04818 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TYMSP04818 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TYMSP04818 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TYMSP04818 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TYMSP04818 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TYMSP04818 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TYMSP04818 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
TYMSP04818 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TYMSP04818 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.13■□□□□ 0.33
TYMSP04818 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TYMSP04818 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TYMSP04818 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.13■□□□□ 0.33
TYMSP04818 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TYMSP04818 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TYMSP04818 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.13■□□□□ 0.33
TYMSP04818 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.13■□□□□ 0.33
TYMSP04818 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TYMSP04818 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TYMSP04818 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TYMSP04818 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TYMSP04818 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TYMSP04818 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TYMSP04818 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
TYMSP04818 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TYMSP04818 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TYMSP04818 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.12■□□□□ 0.33
TYMSP04818 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.12■□□□□ 0.33
TYMSP04818 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.12■□□□□ 0.33
TYMSP04818 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.12■□□□□ 0.33
TYMSP04818 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TYMSP04818 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.12■□□□□ 0.33
TYMSP04818 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TYMSP04818 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TYMSP04818 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TYMSP04818 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TYMSP04818 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.12■□□□□ 0.33
TYMSP04818 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.11■□□□□ 0.33
TYMSP04818 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TYMSP04818 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TYMSP04818 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TYMSP04818 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.11■□□□□ 0.33
TYMSP04818 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TYMSP04818 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TYMSP04818 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TYMSP04818 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.11■□□□□ 0.33
TYMSP04818 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TYMSP04818 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TYMSP04818 AC139530.1-201ENST00000575312 1977 ntBASIC17.1■□□□□ 0.33
TYMSP04818 RAP2CP1-202ENST00000605179 643 ntBASIC17.1■□□□□ 0.33
TYMSP04818 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TYMSP04818 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TYMSP04818 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.09■□□□□ 0.33
TYMSP04818 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TYMSP04818 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TYMSP04818 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TYMSP04818 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TYMSP04818 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TYMSP04818 KRT18P10-201ENST00000388836 1287 ntBASIC17.09■□□□□ 0.33
TYMSP04818 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.09■□□□□ 0.33
TYMSP04818 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.09■□□□□ 0.33
TYMSP04818 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TYMSP04818 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TYMSP04818 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.09■□□□□ 0.33
TYMSP04818 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TYMSP04818 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TYMSP04818 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.09■□□□□ 0.33
TYMSP04818 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TYMSP04818 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TYMSP04818 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.08■□□□□ 0.33
TYMSP04818 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TYMSP04818 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.08■□□□□ 0.33
TYMSP04818 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TYMSP04818 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TYMSP04818 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TYMSP04818 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TYMSP04818 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.08■□□□□ 0.32
TYMSP04818 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TYMSP04818 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TYMSP04818 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.07■□□□□ 0.32
TYMSP04818 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TYMSP04818 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TYMSP04818 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TYMSP04818 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TYMSP04818 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TYMSP04818 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TYMSP04818 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TYMSP04818 GPX1-201ENST00000419349 1106 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms