Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.79■□□□□ 0.6
CD74P04233 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.79■□□□□ 0.6
CD74P04233 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD74P04233 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CD74P04233 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD74P04233 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD74P04233 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD74P04233 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD74P04233 AC026310.3-201ENST00000625186 2373 ntBASIC18.78■□□□□ 0.6
CD74P04233 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CD74P04233 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CD74P04233 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CD74P04233 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.78■□□□□ 0.6
CD74P04233 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD74P04233 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.78■□□□□ 0.6
CD74P04233 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD74P04233 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD74P04233 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD74P04233 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
CD74P04233 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CD74P04233 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD74P04233 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD74P04233 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD74P04233 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CD74P04233 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD74P04233 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CD74P04233 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.77■□□□□ 0.6
CD74P04233 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD74P04233 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.77■□□□□ 0.6
CD74P04233 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD74P04233 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD74P04233 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD74P04233 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.77■□□□□ 0.6
CD74P04233 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD74P04233 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD74P04233 AL353803.4-201ENST00000565882 1934 ntBASIC18.76■□□□□ 0.59
CD74P04233 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD74P04233 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.76■□□□□ 0.59
CD74P04233 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.76■□□□□ 0.59
CD74P04233 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD74P04233 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.76■□□□□ 0.59
CD74P04233 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.76■□□□□ 0.59
CD74P04233 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD74P04233 AC087742.1-201ENST00000575880 1738 ntBASIC18.76■□□□□ 0.59
CD74P04233 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD74P04233 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD74P04233 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD74P04233 AC009831.1-201ENST00000580420 1582 ntBASIC18.76■□□□□ 0.59
CD74P04233 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CD74P04233 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.75■□□□□ 0.59
CD74P04233 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.75■□□□□ 0.59
CD74P04233 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD74P04233 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CD74P04233 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD74P04233 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD74P04233 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.75■□□□□ 0.59
CD74P04233 AC087393.1-201ENST00000582896 145 ntBASIC18.75■□□□□ 0.59
CD74P04233 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD74P04233 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD74P04233 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CD74P04233 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CD74P04233 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CD74P04233 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD74P04233 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CD74P04233 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD74P04233 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD74P04233 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD74P04233 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CD74P04233 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.73■□□□□ 0.59
CD74P04233 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD74P04233 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.73■□□□□ 0.59
CD74P04233 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.73■□□□□ 0.59
CD74P04233 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.73■□□□□ 0.59
CD74P04233 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.73■□□□□ 0.59
CD74P04233 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD74P04233 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD74P04233 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD74P04233 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD74P04233 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.72■□□□□ 0.59
CD74P04233 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.72■□□□□ 0.59
CD74P04233 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD74P04233 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.72■□□□□ 0.59
CD74P04233 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.72■□□□□ 0.59
CD74P04233 AC011551.1-201ENST00000614101 683 ntBASIC18.72■□□□□ 0.59
CD74P04233 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD74P04233 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms