Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.6■□□□□ 0.89
LGI1O95970 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LGI1O95970 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LGI1O95970 AC144652.1-201ENST00000609974 1624 ntBASIC20.6■□□□□ 0.89
LGI1O95970 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LGI1O95970 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LGI1O95970 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LGI1O95970 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.59■□□□□ 0.89
LGI1O95970 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.59■□□□□ 0.89
LGI1O95970 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LGI1O95970 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.59■□□□□ 0.89
LGI1O95970 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.59■□□□□ 0.89
LGI1O95970 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LGI1O95970 LINC00565-201ENST00000562710 2331 ntBASIC20.59■□□□□ 0.89
LGI1O95970 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LGI1O95970 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LGI1O95970 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LGI1O95970 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.59■□□□□ 0.89
LGI1O95970 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.58■□□□□ 0.89
LGI1O95970 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LGI1O95970 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LGI1O95970 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LGI1O95970 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
LGI1O95970 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LGI1O95970 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.58■□□□□ 0.89
LGI1O95970 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
LGI1O95970 AL451085.2-201ENST00000605085 799 ntBASIC20.58■□□□□ 0.89
LGI1O95970 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.58■□□□□ 0.89
LGI1O95970 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.58■□□□□ 0.88
LGI1O95970 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
LGI1O95970 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LGI1O95970 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LGI1O95970 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LGI1O95970 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LGI1O95970 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.57■□□□□ 0.88
LGI1O95970 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LGI1O95970 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LGI1O95970 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.57■□□□□ 0.88
LGI1O95970 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LGI1O95970 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LGI1O95970 MIR6722-201ENST00000617286 78 ntBASIC20.57■□□□□ 0.88
LGI1O95970 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.57■□□□□ 0.88
LGI1O95970 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LGI1O95970 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.57■□□□□ 0.88
LGI1O95970 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGI1O95970 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.56■□□□□ 0.88
LGI1O95970 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LGI1O95970 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LGI1O95970 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
LGI1O95970 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGI1O95970 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LGI1O95970 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.56■□□□□ 0.88
LGI1O95970 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGI1O95970 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGI1O95970 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGI1O95970 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.56■□□□□ 0.88
LGI1O95970 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGI1O95970 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LGI1O95970 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LGI1O95970 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LGI1O95970 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.56■□□□□ 0.88
LGI1O95970 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LGI1O95970 AC021242.3-201ENST00000607598 1377 ntBASIC20.56■□□□□ 0.88
LGI1O95970 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.56■□□□□ 0.88
LGI1O95970 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.55■□□□□ 0.88
LGI1O95970 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LGI1O95970 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LGI1O95970 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LGI1O95970 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LGI1O95970 AC127496.7-201ENST00000625110 1798 ntBASIC20.55■□□□□ 0.88
LGI1O95970 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
LGI1O95970 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LGI1O95970 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LGI1O95970 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.55■□□□□ 0.88
LGI1O95970 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
LGI1O95970 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LGI1O95970 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LGI1O95970 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGI1O95970 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGI1O95970 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGI1O95970 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LGI1O95970 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGI1O95970 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGI1O95970 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LGI1O95970 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGI1O95970 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGI1O95970 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.54■□□□□ 0.88
LGI1O95970 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.54■□□□□ 0.88
LGI1O95970 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.54■□□□□ 0.88
LGI1O95970 AC242852.2-201ENST00000615738 1807 ntBASIC20.54■□□□□ 0.88
LGI1O95970 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.54■□□□□ 0.88
LGI1O95970 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGI1O95970 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LGI1O95970 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGI1O95970 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGI1O95970 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LGI1O95970 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.53■□□□□ 0.88
LGI1O95970 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.53■□□□□ 0.88
LGI1O95970 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LGI1O95970 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms