Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.56■■□□□ 1.36
BEST1O76090 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.56■■□□□ 1.36
BEST1O76090 AL138724.1-201ENST00000606771 1088 ntBASIC23.56■■□□□ 1.36
BEST1O76090 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
BEST1O76090 AC011298.3-201ENST00000615796 283 ntBASIC23.56■■□□□ 1.36
BEST1O76090 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.56■■□□□ 1.36
BEST1O76090 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.56■■□□□ 1.36
BEST1O76090 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.56■■□□□ 1.36
BEST1O76090 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
BEST1O76090 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BEST1O76090 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
BEST1O76090 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BEST1O76090 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.55■■□□□ 1.36
BEST1O76090 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
BEST1O76090 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.55■■□□□ 1.36
BEST1O76090 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.55■■□□□ 1.36
BEST1O76090 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.55■■□□□ 1.36
BEST1O76090 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BEST1O76090 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
BEST1O76090 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
BEST1O76090 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
BEST1O76090 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
BEST1O76090 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
BEST1O76090 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
BEST1O76090 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
BEST1O76090 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
BEST1O76090 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
BEST1O76090 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.54■■□□□ 1.36
BEST1O76090 AL499627.2-201ENST00000606283 725 ntBASIC23.54■■□□□ 1.36
BEST1O76090 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.54■■□□□ 1.36
BEST1O76090 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
BEST1O76090 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
BEST1O76090 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
BEST1O76090 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
BEST1O76090 SUDS3P1-201ENST00000505831 966 ntBASIC23.53■■□□□ 1.36
BEST1O76090 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.53■■□□□ 1.36
BEST1O76090 AC136469.2-201ENST00000623944 1028 ntBASIC23.53■■□□□ 1.36
BEST1O76090 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.53■■□□□ 1.36
BEST1O76090 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.53■■□□□ 1.36
BEST1O76090 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.53■■□□□ 1.36
BEST1O76090 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
BEST1O76090 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
BEST1O76090 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.52■■□□□ 1.36
BEST1O76090 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
BEST1O76090 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.52■■□□□ 1.36
BEST1O76090 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
BEST1O76090 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
BEST1O76090 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.52■■□□□ 1.36
BEST1O76090 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.52■■□□□ 1.36
BEST1O76090 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
BEST1O76090 AC092068.2-201ENST00000590491 1708 ntBASIC23.52■■□□□ 1.36
BEST1O76090 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
BEST1O76090 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
BEST1O76090 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
BEST1O76090 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.51■■□□□ 1.35
BEST1O76090 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
BEST1O76090 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.51■■□□□ 1.35
BEST1O76090 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
BEST1O76090 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.51■■□□□ 1.35
BEST1O76090 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.51■■□□□ 1.35
BEST1O76090 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
BEST1O76090 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.51■■□□□ 1.35
BEST1O76090 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
BEST1O76090 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.5■■□□□ 1.35
BEST1O76090 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.5■■□□□ 1.35
BEST1O76090 AC133637.1-201ENST00000624115 1537 ntBASIC23.5■■□□□ 1.35
BEST1O76090 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
BEST1O76090 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
BEST1O76090 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
BEST1O76090 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
BEST1O76090 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
BEST1O76090 EDA-201ENST00000338901 1233 ntBASIC23.5■■□□□ 1.35
BEST1O76090 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.5■■□□□ 1.35
BEST1O76090 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.5■■□□□ 1.35
BEST1O76090 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
BEST1O76090 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.5■■□□□ 1.35
BEST1O76090 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.5■■□□□ 1.35
BEST1O76090 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
BEST1O76090 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
BEST1O76090 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
BEST1O76090 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
BEST1O76090 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
BEST1O76090 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
BEST1O76090 AL355001.2-201ENST00000620617 1191 ntBASIC23.49■■□□□ 1.35
BEST1O76090 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
BEST1O76090 AC019069.1-201ENST00000610008 1333 ntBASIC23.49■■□□□ 1.35
BEST1O76090 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
BEST1O76090 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
BEST1O76090 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
BEST1O76090 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
BEST1O76090 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
BEST1O76090 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.48■■□□□ 1.35
BEST1O76090 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
BEST1O76090 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
BEST1O76090 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
BEST1O76090 AP001330.3-201ENST00000520123 633 ntBASIC23.48■■□□□ 1.35
BEST1O76090 AL136967.2-201ENST00000623968 743 ntBASIC23.48■■□□□ 1.35
BEST1O76090 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
BEST1O76090 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
BEST1O76090 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms