Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT33AO76009 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.13■□□□□ 0.81
KRT33AO76009 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.13■□□□□ 0.81
KRT33AO76009 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT33AO76009 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.12■□□□□ 0.81
KRT33AO76009 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT33AO76009 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
KRT33AO76009 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.12■□□□□ 0.81
KRT33AO76009 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.12■□□□□ 0.81
KRT33AO76009 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT33AO76009 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT33AO76009 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT33AO76009 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT33AO76009 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT33AO76009 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.11■□□□□ 0.81
KRT33AO76009 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.11■□□□□ 0.81
KRT33AO76009 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT33AO76009 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT33AO76009 AL117328.2-201ENST00000624617 1940 ntBASIC20.11■□□□□ 0.81
KRT33AO76009 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
KRT33AO76009 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT33AO76009 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT33AO76009 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KRT33AO76009 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
KRT33AO76009 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.1■□□□□ 0.81
KRT33AO76009 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT33AO76009 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.1■□□□□ 0.81
KRT33AO76009 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT33AO76009 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.1■□□□□ 0.81
KRT33AO76009 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT33AO76009 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
KRT33AO76009 AL356740.2-201ENST00000601559 647 ntBASIC20.1■□□□□ 0.81
KRT33AO76009 AC131212.1-201ENST00000613771 668 ntBASIC20.1■□□□□ 0.81
KRT33AO76009 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.1■□□□□ 0.81
KRT33AO76009 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT33AO76009 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT33AO76009 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT33AO76009 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT33AO76009 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRT33AO76009 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT33AO76009 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT33AO76009 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT33AO76009 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT33AO76009 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
KRT33AO76009 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.09■□□□□ 0.81
KRT33AO76009 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRT33AO76009 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT33AO76009 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT33AO76009 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KRT33AO76009 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT33AO76009 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
KRT33AO76009 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.08■□□□□ 0.81
KRT33AO76009 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
KRT33AO76009 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRT33AO76009 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRT33AO76009 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT33AO76009 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
KRT33AO76009 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
KRT33AO76009 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT33AO76009 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT33AO76009 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
KRT33AO76009 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT33AO76009 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.07■□□□□ 0.8
KRT33AO76009 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.07■□□□□ 0.8
KRT33AO76009 PKD1P6-201ENST00000343738 4769 ntBASIC20.07■□□□□ 0.8
KRT33AO76009 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT33AO76009 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.07■□□□□ 0.8
KRT33AO76009 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT33AO76009 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
KRT33AO76009 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT33AO76009 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT33AO76009 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT33AO76009 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.06■□□□□ 0.8
KRT33AO76009 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT33AO76009 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT33AO76009 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT33AO76009 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
KRT33AO76009 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT33AO76009 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT33AO76009 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT33AO76009 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT33AO76009 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT33AO76009 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT33AO76009 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT33AO76009 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.05■□□□□ 0.8
KRT33AO76009 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
KRT33AO76009 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT33AO76009 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT33AO76009 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
KRT33AO76009 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT33AO76009 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT33AO76009 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
KRT33AO76009 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT33AO76009 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT33AO76009 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT33AO76009 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.03■□□□□ 0.8
KRT33AO76009 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT33AO76009 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
KRT33AO76009 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT33AO76009 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms