Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RPP40O75818 BX842568.3-201ENST00000418104 571 ntBASIC22.9■■□□□ 1.26
RPP40O75818 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RPP40O75818 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.9■■□□□ 1.26
RPP40O75818 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.9■■□□□ 1.26
RPP40O75818 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RPP40O75818 AC022517.1-201ENST00000592429 346 ntBASIC22.9■■□□□ 1.26
RPP40O75818 AL137784.2-201ENST00000607332 1000 ntBASIC22.9■■□□□ 1.26
RPP40O75818 IKBKGP1-201ENST00000612193 1073 ntBASIC22.9■■□□□ 1.26
RPP40O75818 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
RPP40O75818 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RPP40O75818 C17orf82-201ENST00000623772 1530 ntBASIC22.9■■□□□ 1.26
RPP40O75818 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RPP40O75818 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RPP40O75818 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RPP40O75818 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.89■■□□□ 1.26
RPP40O75818 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.89■■□□□ 1.26
RPP40O75818 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
RPP40O75818 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.89■■□□□ 1.26
RPP40O75818 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RPP40O75818 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.89■■□□□ 1.25
RPP40O75818 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.89■■□□□ 1.25
RPP40O75818 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
RPP40O75818 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.89■■□□□ 1.25
RPP40O75818 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.89■■□□□ 1.25
RPP40O75818 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RPP40O75818 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RPP40O75818 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.89■■□□□ 1.25
RPP40O75818 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RPP40O75818 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.89■■□□□ 1.25
RPP40O75818 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RPP40O75818 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RPP40O75818 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RPP40O75818 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.89■■□□□ 1.25
RPP40O75818 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPP40O75818 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RPP40O75818 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.88■■□□□ 1.25
RPP40O75818 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.88■■□□□ 1.25
RPP40O75818 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.88■■□□□ 1.25
RPP40O75818 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.88■■□□□ 1.25
RPP40O75818 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.88■■□□□ 1.25
RPP40O75818 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPP40O75818 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPP40O75818 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.88■■□□□ 1.25
RPP40O75818 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.88■■□□□ 1.25
RPP40O75818 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RPP40O75818 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPP40O75818 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.88■■□□□ 1.25
RPP40O75818 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RPP40O75818 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RPP40O75818 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPP40O75818 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.87■■□□□ 1.25
RPP40O75818 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.87■■□□□ 1.25
RPP40O75818 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.87■■□□□ 1.25
RPP40O75818 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPP40O75818 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RPP40O75818 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RPP40O75818 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RPP40O75818 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RPP40O75818 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.86■■□□□ 1.25
RPP40O75818 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
RPP40O75818 AC006455.2-201ENST00000429931 906 ntBASIC22.86■■□□□ 1.25
RPP40O75818 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
RPP40O75818 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
RPP40O75818 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RPP40O75818 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RPP40O75818 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RPP40O75818 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RPP40O75818 ALDH1A3-203ENST00000557963 1670 ntBASIC22.85■■□□□ 1.25
RPP40O75818 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RPP40O75818 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RPP40O75818 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.85■■□□□ 1.25
RPP40O75818 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.85■■□□□ 1.25
RPP40O75818 AC009086.3-201ENST00000623486 1008 ntBASIC22.85■■□□□ 1.25
RPP40O75818 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RPP40O75818 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RPP40O75818 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
RPP40O75818 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
RPP40O75818 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
RPP40O75818 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RPP40O75818 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
RPP40O75818 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RPP40O75818 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
RPP40O75818 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
RPP40O75818 KRT18P5-201ENST00000436075 1291 ntBASIC22.84■■□□□ 1.25
RPP40O75818 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.84■■□□□ 1.25
RPP40O75818 MIR3181-201ENST00000578512 73 ntBASIC22.84■■□□□ 1.25
RPP40O75818 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RPP40O75818 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
RPP40O75818 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.84■■□□□ 1.25
RPP40O75818 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
RPP40O75818 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RPP40O75818 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
RPP40O75818 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RPP40O75818 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.83■■□□□ 1.25
RPP40O75818 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RPP40O75818 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.83■■□□□ 1.25
RPP40O75818 YBX1P1-201ENST00000445822 960 ntBASIC22.83■■□□□ 1.25
RPP40O75818 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RPP40O75818 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms