Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF253O75346 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF253O75346 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF253O75346 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ZNF253O75346 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF253O75346 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ZNF253O75346 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF253O75346 AC022616.5-201ENST00000518796 181 ntBASIC17.27■□□□□ 0.36
ZNF253O75346 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ZNF253O75346 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF253O75346 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF253O75346 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
ZNF253O75346 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF253O75346 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
ZNF253O75346 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF253O75346 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF253O75346 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF253O75346 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ZNF253O75346 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF253O75346 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF253O75346 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF253O75346 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.26■□□□□ 0.35
ZNF253O75346 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF253O75346 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF253O75346 ALDH1A3-203ENST00000557963 1670 ntBASIC17.26■□□□□ 0.35
ZNF253O75346 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF253O75346 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF253O75346 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF253O75346 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF253O75346 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ZNF253O75346 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ZNF253O75346 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF253O75346 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF253O75346 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF253O75346 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF253O75346 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.25■□□□□ 0.35
ZNF253O75346 AC019171.1-201ENST00000601251 1056 ntBASIC17.25■□□□□ 0.35
ZNF253O75346 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZNF253O75346 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF253O75346 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF253O75346 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF253O75346 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF253O75346 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF253O75346 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ZNF253O75346 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF253O75346 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ZNF253O75346 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
ZNF253O75346 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF253O75346 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF253O75346 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF253O75346 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.24■□□□□ 0.35
ZNF253O75346 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ZNF253O75346 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF253O75346 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF253O75346 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF253O75346 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF253O75346 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF253O75346 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF253O75346 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF253O75346 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF253O75346 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF253O75346 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF253O75346 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ZNF253O75346 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF253O75346 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF253O75346 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF253O75346 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
ZNF253O75346 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF253O75346 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF253O75346 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ZNF253O75346 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF253O75346 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF253O75346 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF253O75346 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF253O75346 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF253O75346 AC131274.2-201ENST00000580697 1507 ntBASIC17.22■□□□□ 0.35
ZNF253O75346 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF253O75346 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF253O75346 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF253O75346 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ZNF253O75346 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF253O75346 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ZNF253O75346 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF253O75346 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ZNF253O75346 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF253O75346 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.21■□□□□ 0.35
ZNF253O75346 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF253O75346 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ZNF253O75346 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ZNF253O75346 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ZNF253O75346 RARRES2P2-201ENST00000394842 485 ntBASIC17.21■□□□□ 0.35
ZNF253O75346 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF253O75346 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF253O75346 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF253O75346 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF253O75346 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF253O75346 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ZNF253O75346 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ZNF253O75346 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.21■□□□□ 0.34
ZNF253O75346 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms