Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
CTNSO60931 SYT6-210ENST00000641643 1587 ntBASIC20.94■□□□□ 0.94
CTNSO60931 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.94■□□□□ 0.94
CTNSO60931 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTNSO60931 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTNSO60931 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.94■□□□□ 0.94
CTNSO60931 AC006455.2-201ENST00000429931 906 ntBASIC20.94■□□□□ 0.94
CTNSO60931 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTNSO60931 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTNSO60931 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTNSO60931 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.94■□□□□ 0.94
CTNSO60931 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.94■□□□□ 0.94
CTNSO60931 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.94■□□□□ 0.94
CTNSO60931 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.94■□□□□ 0.94
CTNSO60931 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTNSO60931 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.94■□□□□ 0.94
CTNSO60931 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNSO60931 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CTNSO60931 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CTNSO60931 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNSO60931 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.93■□□□□ 0.94
CTNSO60931 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNSO60931 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNSO60931 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.93■□□□□ 0.94
CTNSO60931 AL499627.2-201ENST00000606283 725 ntBASIC20.93■□□□□ 0.94
CTNSO60931 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.93■□□□□ 0.94
CTNSO60931 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.93■□□□□ 0.94
CTNSO60931 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTNSO60931 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNSO60931 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.92■□□□□ 0.94
CTNSO60931 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTNSO60931 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.92■□□□□ 0.94
CTNSO60931 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNSO60931 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.92■□□□□ 0.94
CTNSO60931 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.92■□□□□ 0.94
CTNSO60931 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNSO60931 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.92■□□□□ 0.94
CTNSO60931 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNSO60931 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.92■□□□□ 0.94
CTNSO60931 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNSO60931 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNSO60931 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.92■□□□□ 0.94
CTNSO60931 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNSO60931 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CTNSO60931 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNSO60931 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNSO60931 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTNSO60931 UNC93B3-201ENST00000308076 687 ntBASIC20.91■□□□□ 0.94
CTNSO60931 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTNSO60931 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTNSO60931 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CTNSO60931 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTNSO60931 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.91■□□□□ 0.94
CTNSO60931 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.91■□□□□ 0.94
CTNSO60931 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTNSO60931 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.91■□□□□ 0.94
CTNSO60931 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
CTNSO60931 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.91■□□□□ 0.94
CTNSO60931 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.91■□□□□ 0.94
CTNSO60931 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTNSO60931 MIR3181-201ENST00000578512 73 ntBASIC20.91■□□□□ 0.94
CTNSO60931 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.91■□□□□ 0.94
CTNSO60931 AL138724.1-201ENST00000606771 1088 ntBASIC20.91■□□□□ 0.94
CTNSO60931 pRNA.6-201ENST00000610482 90 ntBASIC20.91■□□□□ 0.94
CTNSO60931 pRNA.5-201ENST00000612139 90 ntBASIC20.91■□□□□ 0.94
CTNSO60931 pRNA.11-201ENST00000618423 90 ntBASIC20.91■□□□□ 0.94
CTNSO60931 pRNA.13-201ENST00000619112 90 ntBASIC20.91■□□□□ 0.94
CTNSO60931 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTNSO60931 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTNSO60931 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTNSO60931 DUSP8P3-201ENST00000399571 1760 ntBASIC20.9■□□□□ 0.94
CTNSO60931 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTNSO60931 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTNSO60931 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CTNSO60931 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTNSO60931 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTNSO60931 SERBP1P1-201ENST00000396021 1160 ntBASIC20.9■□□□□ 0.94
CTNSO60931 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.9■□□□□ 0.94
CTNSO60931 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTNSO60931 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTNSO60931 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTNSO60931 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CTNSO60931 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CTNSO60931 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTNSO60931 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.89■□□□□ 0.94
CTNSO60931 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTNSO60931 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTNSO60931 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CTNSO60931 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.89■□□□□ 0.93
CTNSO60931 AC096631.2-201ENST00000436136 790 ntBASIC20.89■□□□□ 0.93
CTNSO60931 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.89■□□□□ 0.93
CTNSO60931 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTNSO60931 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTNSO60931 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.89■□□□□ 0.93
CTNSO60931 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.89■□□□□ 0.93
CTNSO60931 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTNSO60931 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CTNSO60931 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTNSO60931 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTNSO60931 DUSP8P5-201ENST00000422884 1815 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms