Protein–RNA interactions for Protein: O60516

EIF4EBP3, Eukaryotic translation initiation factor 4E-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4EBP3O60516 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EIF4EBP3O60516 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
EIF4EBP3O60516 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EIF4EBP3O60516 AL161729.1-201ENST00000604104 1402 ntBASIC14.9□□□□□ -0.02
EIF4EBP3O60516 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
EIF4EBP3O60516 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
EIF4EBP3O60516 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
EIF4EBP3O60516 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
EIF4EBP3O60516 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
EIF4EBP3O60516 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
EIF4EBP3O60516 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC14.89□□□□□ -0.03
EIF4EBP3O60516 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
EIF4EBP3O60516 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EIF4EBP3O60516 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EIF4EBP3O60516 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.89□□□□□ -0.03
EIF4EBP3O60516 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EIF4EBP3O60516 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
EIF4EBP3O60516 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
EIF4EBP3O60516 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
EIF4EBP3O60516 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EIF4EBP3O60516 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
EIF4EBP3O60516 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 MIR3960-201ENST00000583311 91 ntBASIC14.88□□□□□ -0.03
EIF4EBP3O60516 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 CD37-213ENST00000598095 1598 ntTSL 2 BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EIF4EBP3O60516 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 MOB2-207ENST00000614710 705 ntTSL 5 BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EIF4EBP3O60516 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
EIF4EBP3O60516 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
EIF4EBP3O60516 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.86□□□□□ -0.03
EIF4EBP3O60516 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
EIF4EBP3O60516 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EIF4EBP3O60516 AC010542.4-201ENST00000563151 1910 ntBASIC14.86□□□□□ -0.03
EIF4EBP3O60516 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
EIF4EBP3O60516 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EIF4EBP3O60516 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
EIF4EBP3O60516 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC14.86□□□□□ -0.03
EIF4EBP3O60516 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC14.86□□□□□ -0.03
EIF4EBP3O60516 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
EIF4EBP3O60516 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EIF4EBP3O60516 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EIF4EBP3O60516 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.86□□□□□ -0.03
EIF4EBP3O60516 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.85□□□□□ -0.03
EIF4EBP3O60516 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EIF4EBP3O60516 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EIF4EBP3O60516 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms