Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
URB1O60287 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
URB1O60287 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.11■□□□□ 0.97
URB1O60287 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
URB1O60287 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
URB1O60287 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.11■□□□□ 0.97
URB1O60287 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
URB1O60287 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
URB1O60287 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
URB1O60287 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
URB1O60287 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
URB1O60287 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
URB1O60287 AC010525.1-201ENST00000585559 441 ntBASIC21.1■□□□□ 0.97
URB1O60287 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.1■□□□□ 0.97
URB1O60287 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.1■□□□□ 0.97
URB1O60287 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
URB1O60287 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
URB1O60287 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.09■□□□□ 0.97
URB1O60287 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
URB1O60287 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.09■□□□□ 0.97
URB1O60287 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
URB1O60287 AC004854.2-201ENST00000608450 1441 ntBASIC21.09■□□□□ 0.97
URB1O60287 AIRN-201ENST00000601203 4374 ntBASIC21.09■□□□□ 0.97
URB1O60287 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
URB1O60287 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
URB1O60287 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.09■□□□□ 0.97
URB1O60287 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
URB1O60287 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
URB1O60287 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
URB1O60287 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.08■□□□□ 0.97
URB1O60287 KRT19P1-201ENST00000405746 1186 ntBASIC21.08■□□□□ 0.97
URB1O60287 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.08■□□□□ 0.97
URB1O60287 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.08■□□□□ 0.97
URB1O60287 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
URB1O60287 AL121749.1-202ENST00000609313 2153 ntBASIC21.08■□□□□ 0.96
URB1O60287 AC010501.1-201ENST00000606270 1962 ntBASIC21.08■□□□□ 0.96
URB1O60287 AP004607.4-201ENST00000530158 1459 ntBASIC21.08■□□□□ 0.96
URB1O60287 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.08■□□□□ 0.96
URB1O60287 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
URB1O60287 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.08■□□□□ 0.96
URB1O60287 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
URB1O60287 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
URB1O60287 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.07■□□□□ 0.96
URB1O60287 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
URB1O60287 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
URB1O60287 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
URB1O60287 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.07■□□□□ 0.96
URB1O60287 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.07■□□□□ 0.96
URB1O60287 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
URB1O60287 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
URB1O60287 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
URB1O60287 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
URB1O60287 AC133637.1-201ENST00000624115 1537 ntBASIC21.06■□□□□ 0.96
URB1O60287 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
URB1O60287 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
URB1O60287 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
URB1O60287 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
URB1O60287 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
URB1O60287 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
URB1O60287 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
URB1O60287 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
URB1O60287 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
URB1O60287 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
URB1O60287 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.06■□□□□ 0.96
URB1O60287 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.06■□□□□ 0.96
URB1O60287 AC141586.4-201ENST00000624558 1573 ntBASIC21.06■□□□□ 0.96
URB1O60287 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
URB1O60287 SLC6A10P-202ENST00000431994 2058 ntBASIC21.05■□□□□ 0.96
URB1O60287 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
URB1O60287 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
URB1O60287 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
URB1O60287 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
URB1O60287 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
URB1O60287 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.05■□□□□ 0.96
URB1O60287 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
URB1O60287 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
URB1O60287 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.05■□□□□ 0.96
URB1O60287 MIR4651-201ENST00000582622 73 ntBASIC21.05■□□□□ 0.96
URB1O60287 AC008687.6-201ENST00000596318 630 ntBASIC21.05■□□□□ 0.96
URB1O60287 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
URB1O60287 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.05■□□□□ 0.96
URB1O60287 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
URB1O60287 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
URB1O60287 KRT18P11-201ENST00000435214 1283 ntBASIC21.04■□□□□ 0.96
URB1O60287 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
URB1O60287 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.04■□□□□ 0.96
URB1O60287 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
URB1O60287 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
URB1O60287 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
URB1O60287 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
URB1O60287 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
URB1O60287 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
URB1O60287 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.04■□□□□ 0.96
URB1O60287 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
URB1O60287 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
URB1O60287 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.03■□□□□ 0.96
URB1O60287 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
URB1O60287 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.03■□□□□ 0.96
URB1O60287 TPRG1LP1-201ENST00000598702 760 ntBASIC21.03■□□□□ 0.96
URB1O60287 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms