Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
MSI1O43347 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
MSI1O43347 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.22■■□□□ 1.31
MSI1O43347 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.22■■□□□ 1.31
MSI1O43347 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
MSI1O43347 AL353803.4-201ENST00000565882 1934 ntBASIC23.22■■□□□ 1.31
MSI1O43347 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
MSI1O43347 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
MSI1O43347 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
MSI1O43347 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.22■■□□□ 1.31
MSI1O43347 DUX4L4-201ENST00000566884 1269 ntBASIC23.22■■□□□ 1.31
MSI1O43347 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.22■■□□□ 1.31
MSI1O43347 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.22■■□□□ 1.31
MSI1O43347 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MSI1O43347 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.22■■□□□ 1.31
MSI1O43347 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.22■■□□□ 1.31
MSI1O43347 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.22■■□□□ 1.31
MSI1O43347 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.21■■□□□ 1.31
MSI1O43347 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MSI1O43347 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MSI1O43347 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.21■■□□□ 1.31
MSI1O43347 AL138724.1-201ENST00000606771 1088 ntBASIC23.21■■□□□ 1.31
MSI1O43347 AC005837.3-201ENST00000612163 286 ntBASIC23.21■■□□□ 1.31
MSI1O43347 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
MSI1O43347 AC011298.3-201ENST00000615796 283 ntBASIC23.21■■□□□ 1.31
MSI1O43347 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MSI1O43347 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MSI1O43347 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
MSI1O43347 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
MSI1O43347 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
MSI1O43347 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MSI1O43347 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.2■■□□□ 1.3
MSI1O43347 AL031432.3-201ENST00000607698 485 ntBASIC23.2■■□□□ 1.3
MSI1O43347 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.2■■□□□ 1.3
MSI1O43347 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MSI1O43347 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MSI1O43347 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.2■■□□□ 1.3
MSI1O43347 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MSI1O43347 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
MSI1O43347 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MSI1O43347 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MSI1O43347 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MSI1O43347 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
MSI1O43347 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.19■■□□□ 1.3
MSI1O43347 AC133561.4-201ENST00000566112 224 ntBASIC23.19■■□□□ 1.3
MSI1O43347 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.19■■□□□ 1.3
MSI1O43347 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MSI1O43347 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.19■■□□□ 1.3
MSI1O43347 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
MSI1O43347 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MSI1O43347 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
MSI1O43347 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MSI1O43347 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
MSI1O43347 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.18■■□□□ 1.3
MSI1O43347 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.18■■□□□ 1.3
MSI1O43347 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
MSI1O43347 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.18■■□□□ 1.3
MSI1O43347 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.18■■□□□ 1.3
MSI1O43347 AC136469.2-201ENST00000623944 1028 ntBASIC23.18■■□□□ 1.3
MSI1O43347 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MSI1O43347 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.18■■□□□ 1.3
MSI1O43347 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.18■■□□□ 1.3
MSI1O43347 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
MSI1O43347 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
MSI1O43347 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MSI1O43347 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
MSI1O43347 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
MSI1O43347 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.17■■□□□ 1.3
MSI1O43347 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.17■■□□□ 1.3
MSI1O43347 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
MSI1O43347 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.17■■□□□ 1.3
MSI1O43347 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
MSI1O43347 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
MSI1O43347 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.16■■□□□ 1.3
MSI1O43347 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.16■■□□□ 1.3
MSI1O43347 AC019069.1-201ENST00000610008 1333 ntBASIC23.16■■□□□ 1.3
MSI1O43347 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MSI1O43347 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MSI1O43347 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MSI1O43347 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
MSI1O43347 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.16■■□□□ 1.3
MSI1O43347 AL499627.2-201ENST00000606283 725 ntBASIC23.16■■□□□ 1.3
MSI1O43347 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
MSI1O43347 AC133637.1-201ENST00000624115 1537 ntBASIC23.16■■□□□ 1.3
MSI1O43347 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
MSI1O43347 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.16■■□□□ 1.3
MSI1O43347 AC092068.2-201ENST00000590491 1708 ntBASIC23.16■■□□□ 1.3
MSI1O43347 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
MSI1O43347 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
MSI1O43347 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MSI1O43347 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MSI1O43347 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
MSI1O43347 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
MSI1O43347 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.15■■□□□ 1.3
MSI1O43347 EDA-201ENST00000338901 1233 ntBASIC23.15■■□□□ 1.3
MSI1O43347 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.15■■□□□ 1.3
MSI1O43347 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.15■■□□□ 1.3
MSI1O43347 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MSI1O43347 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MSI1O43347 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms